RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 IL9P15248 144 aa23■■□□□ 1.27
UPK3B-205ENST00000490360 MFAP1P55081 439 aaKnown RBP23■■□□□ 1.27
UPK3B-205ENST00000490360 ASPRV1Q53RT3 343 aa23■■□□□ 1.27
UPK3B-205ENST00000490360 ALYREFQ86V81 257 aaKnown RBP23■■□□□ 1.27
UPK3B-205ENST00000490360 IQCA1Q86XH1 822 aa23■■□□□ 1.27
UPK3B-205ENST00000490360 MYOCDQ8IZQ8 938 aa23■■□□□ 1.27
UPK3B-205ENST00000490360 TBC1D5Q92609 795 aa23■■□□□ 1.27
UPK3B-205ENST00000490360 UBA5Q9GZZ9 404 aa23■■□□□ 1.27
UPK3B-205ENST00000490360 MAP3K20Q9NYL2 800 aaKnown RBP23■■□□□ 1.27
UPK3B-205ENST00000490360 DCXO43602 365 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 NCK2O43639 380 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 MKRN4PQ13434 485 aaPredicted RBP22.99■■□□□ 1.27
UPK3B-205ENST00000490360 MBTPS1Q14703 1052 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 EPC2Q52LR7 807 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.99■■□□□ 1.27
UPK3B-205ENST00000490360 SERINC5Q86VE9 423 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 FBXO11Q86XK2 927 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 ADGRF4Q8IZF3 695 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 PNMA1Q8ND90 353 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 BANK1Q8NDB2 785 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 DBF4BQ8NFT6 615 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 UIMC1Q96RL1 719 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 PXMP2Q9NR77 195 aa22.99■■□□□ 1.27
UPK3B-205ENST00000490360 H3BNC9 293 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 CAND2O75155 1236 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 ZNF286BP0CG31 522 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 TGFB3P10600 412 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 EIF2AK2P19525 551 aaKnown RBP22.98■■□□□ 1.27
UPK3B-205ENST00000490360 THPOP40225 353 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 HAND2P61296 217 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 PLEKHG4Q58EX7 1191 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 SAMD3Q8N6K7 520 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 ANKS1AQ92625 1134 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 PABPC5Q96DU9 382 aaKnown RBP22.98■■□□□ 1.27
UPK3B-205ENST00000490360 FAM227BQ96M60 508 aa22.98■■□□□ 1.27
UPK3B-205ENST00000490360 COL4A6Q14031 1691 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 A0A0D9SFI3 127 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 POTEB3A0JP26 581 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 COL19A1Q14993 1142 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 MYSM1Q5VVJ2 828 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 POTEBQ6S5H4 581 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 SEPT8Q92599 483 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 YME1L1Q96TA2 773 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 UPF3BQ9BZI7 483 aaKnown RBP22.97■■□□□ 1.27
UPK3B-205ENST00000490360 KAT14Q9H8E8 782 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 PCDHB15Q9Y5E8 787 aa22.97■■□□□ 1.27
UPK3B-205ENST00000490360 GHRHRQ02643 423 aa22.96■■□□□ 1.27
UPK3B-205ENST00000490360 QRICH1Q2TAL8 776 aa22.96■■□□□ 1.27
UPK3B-205ENST00000490360 CELF3Q5SZQ8 465 aaKnown RBP22.96■■□□□ 1.27
UPK3B-205ENST00000490360 WNT8BQ93098 351 aa22.96■■□□□ 1.27
UPK3B-205ENST00000490360 TOP1MTQ969P6 601 aa22.96■■□□□ 1.27
UPK3B-205ENST00000490360 SPATA33Q96N06 139 aa22.96■■□□□ 1.27
UPK3B-205ENST00000490360 CPVLQ9H3G5 476 aa22.96■■□□□ 1.27
UPK3B-205ENST00000490360 NSUN3Q9H649 340 aaKnown RBP22.96■■□□□ 1.27
UPK3B-205ENST00000490360 CCDC171Q6TFL3 1326 aa22.96■■□□□ 1.27
UPK3B-205ENST00000490360 DHX16O60231 1041 aaKnown RBP22.95■■□□□ 1.26
UPK3B-205ENST00000490360 CFBP00751 764 aa22.95■■□□□ 1.26
UPK3B-205ENST00000490360 HSD17B4P51659 736 aa22.95■■□□□ 1.26
UPK3B-205ENST00000490360 PDE1AP54750 535 aa22.95■■□□□ 1.26
UPK3B-205ENST00000490360 ZNF200P98182 395 aaPredicted RBP22.95■■□□□ 1.26
UPK3B-205ENST00000490360 GPM6BQ13491 265 aa22.95■■□□□ 1.26
UPK3B-205ENST00000490360 TBC1D10CQ8IV04 446 aa22.95■■□□□ 1.26
UPK3B-205ENST00000490360 ATP6V0A1Q93050 837 aa22.95■■□□□ 1.26
UPK3B-205ENST00000490360 AMNQ9BXJ7 453 aa22.95■■□□□ 1.26
UPK3B-205ENST00000490360 C17orf102A2RUQ5 167 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 H3BQ06 376 aaPredicted RBP22.94■■□□□ 1.26
UPK3B-205ENST00000490360 ZNF213O14771 459 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 PARP1P09874 1014 aaKnown RBP22.94■■□□□ 1.26
UPK3B-205ENST00000490360 MRE11P49959 708 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 STOX1Q6ZVD7 989 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 ZNF589Q86UQ0 364 aaPredicted RBP22.94■■□□□ 1.26
UPK3B-205ENST00000490360 TMEM192Q8IY95 271 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 APBB2Q92870 758 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 ZKSCAN3Q9BRR0 538 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 RALGAPA2Q2PPJ7 1873 aa22.94■■□□□ 1.26
UPK3B-205ENST00000490360 HOXC8P31273 242 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 ZP2Q05996 745 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 TRAF1Q13077 416 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 HSDL1Q3SXM5 330 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 ANKRD45Q5TZF3 282 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 VSIG10LQ86VR7 867 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 ADHFE1Q8IWW8 467 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 PDCD2LQ9BRP1 358 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 C16orf70Q9BSU1 422 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 JMJD4Q9H9V9 463 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 NLRC5Q86WI3 1866 aa22.93■■□□□ 1.26
UPK3B-205ENST00000490360 NEDD4P46934 1319 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 C19orf67A6NJJ6 358 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 H3BRB1 525 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 GGPS1O95749 300 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 GNAT1P11488 350 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 NMIQ13287 307 aaPredicted RBP22.92■■□□□ 1.26
UPK3B-205ENST00000490360 TCEAL5Q5H9L2 206 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 DIEXFQ68CQ4 756 aaKnown RBP22.92■■□□□ 1.26
UPK3B-205ENST00000490360 ZSCAN10Q96SZ4 725 aaPredicted RBP22.92■■□□□ 1.26
UPK3B-205ENST00000490360 POP1Q99575 1024 aaKnown RBP22.92■■□□□ 1.26
UPK3B-205ENST00000490360 LMAN2LQ9H0V9 348 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 TUT1Q9H6E5 874 aaKnown RBP22.92■■□□□ 1.26
UPK3B-205ENST00000490360 MLXIPQ9HAP2 919 aa22.92■■□□□ 1.26
UPK3B-205ENST00000490360 RWDD3Q9Y3V2 267 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms