RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ICAM3P32942 547 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 NAPAP54920 295 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 SP2Q02086 613 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 PPP1R18Q6NYC8 613 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 XRRA1Q6P2D8 792 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 PSRC1Q6PGN9 363 aaPredicted RBP22.7■■□□□ 1.22
SMC4-222ENST00000490207 KAT2BQ92831 832 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 SPATA33Q96N06 139 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.7■■□□□ 1.228e-18■□□□□ 10.5
SMC4-222ENST00000490207 KATNAL1Q9BW62 490 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 WNT8AQ9H1J5 351 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 RTEL1Q9NZ71 1219 aa22.7■■□□□ 1.22
SMC4-222ENST00000490207 SPDYE3A6NKU9 549 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 hCG_1984214I3L0E3 225 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 FIBPO43427 364 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 HOXD8P13378 290 aaPredicted RBP22.69■■□□□ 1.22
SMC4-222ENST00000490207 CCL23P55773 120 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 Q7L0L9 218 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 FBXL16Q8N461 479 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 DEFB123Q8N688 67 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 ZNF713Q8N859 430 aaPredicted RBP22.69■■□□□ 1.22
SMC4-222ENST00000490207 MLXIPQ9HAP2 919 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 IL23AQ9NPF7 189 aa22.69■■□□□ 1.22
SMC4-222ENST00000490207 LAMA2P24043 3122 aaKnown RBP22.69■■□□□ 1.22
SMC4-222ENST00000490207 CCDC196A0A1B0GTZ2 297 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 F2P00734 622 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 ACRP10323 421 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 PSEN2P49810 448 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 SEMA3FQ13275 785 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 HSDL1Q3SXM5 330 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 USP26Q9BXU7 913 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 AGXT2Q9BYV1 514 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 NOD1Q9Y239 953 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 V9GY48 417 aaPredicted RBP22.68■■□□□ 1.22
SMC4-222ENST00000490207 SCN5AQ14524 2016 aa22.68■■□□□ 1.22
SMC4-222ENST00000490207 STXBP3O00186 592 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 ADD1P35611 737 aaKnown RBP22.67■■□□□ 1.22
SMC4-222ENST00000490207 SMAD3P84022 425 aaKnown RBP22.67■■□□□ 1.22
SMC4-222ENST00000490207 NEDD9Q14511 834 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 MFSD10Q14728 455 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 TMEM240Q5SV17 173 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 TYW1BQ6NUM6 668 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 C16orf59Q7L2K0 433 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 NLRX1Q86UT6 975 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 SESTD1Q86VW0 696 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 ALG1Q9BT22 464 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 EHMT1Q9H9B1 1298 aa22.67■■□□□ 1.22
SMC4-222ENST00000490207 SPATA31C2B4DYI2 1134 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 ADCY7P51828 1080 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 KIAA0753Q2KHM9 967 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 RUFY3Q7L099 469 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 SCLYQ96I15 445 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 RIC8AQ9NPQ8 531 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 BARHL2Q9NY43 387 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 PCDHA6Q9UN73 950 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 PCDHA8Q9Y5H6 950 aa22.66■■□□□ 1.22
SMC4-222ENST00000490207 NOP56O00567 594 aaKnown RBP22.65■■□□□ 1.22
SMC4-222ENST00000490207 PPFIA4O75335 1185 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 PTGISQ16647 500 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 GDF6Q6KF10 455 aaPredicted RBP22.65■■□□□ 1.22
SMC4-222ENST00000490207 METTL7BQ6UX53 244 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 ZNF365Q70YC5 407 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 CYFIP1Q7L576 1253 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 TEX2Q8IWB9 1127 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 C7orf31Q8N865 590 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 GPRASP2Q96D09 838 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 ZSWIM6Q9HCJ5 1215 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 GTF2IRD1Q9UHL9 959 aa22.65■■□□□ 1.22
SMC4-222ENST00000490207 TRIP12Q14669 1992 aaPredicted RBP22.64■■□□□ 1.21
SMC4-222ENST00000490207 HAS3O00219 553 aa22.64■■□□□ 1.21
SMC4-222ENST00000490207 PITPNM1O00562 1244 aa22.64■■□□□ 1.21
SMC4-222ENST00000490207 PFKFB3Q16875 520 aaPredicted RBP22.64■■□□□ 1.21
SMC4-222ENST00000490207 ZNF697Q5TEC3 545 aa22.64■■□□□ 1.21
SMC4-222ENST00000490207 FAM109BQ6ICB4 259 aaPredicted RBP22.64■■□□□ 1.21
SMC4-222ENST00000490207 BCAS3Q9H6U6 928 aa22.64■■□□□ 1.21
SMC4-222ENST00000490207 HDAC6Q9UBN7 1215 aa22.64■■□□□ 1.21
SMC4-222ENST00000490207 CYP46A1Q9Y6A2 500 aa22.64■■□□□ 1.21
SMC4-222ENST00000490207 GBF1Q92538 1859 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 SMCO2A6NFE2 343 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 SCG2P13521 617 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 BFSP2Q13515 415 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 RPUSD2Q8IZ73 545 aaKnown RBP22.63■■□□□ 1.21
SMC4-222ENST00000490207 CCDC155Q8N6L0 562 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 CDHR1Q96JP9 859 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 PGBD1Q96JS3 809 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 SENP7Q9BQF6 1050 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 GLT8D2Q9H1C3 349 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 MTIF3Q9H2K0 278 aaKnown RBP22.63■■□□□ 1.21
SMC4-222ENST00000490207 MTMR10Q9NXD2 777 aa22.63■■□□□ 1.21
SMC4-222ENST00000490207 LGALS2P05162 132 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 TOB2Q14106 344 aaPredicted RBP22.62■■□□□ 1.21
SMC4-222ENST00000490207 RASIP1Q5U651 963 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 RETREG2Q8NC44 543 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 CAGE1Q8TC20 777 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 HERVK_113Q902F9 699 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 CTAGE1Q96RT6 745 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 C16orf70Q9BSU1 422 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 ANO3Q9BYT9 981 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 TM6SF1Q9BZW5 370 aa22.62■■□□□ 1.21
SMC4-222ENST00000490207 UBIAD1Q9Y5Z9 338 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms