RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 EMID1Q96A84 441 aaPredicted RBP14.18□□□□□ -0.14
HDAC1-210ENST00000490081 PGBD1Q96JS3 809 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 PAK6Q9NQU5 681 aaPredicted RBP14.18□□□□□ -0.14
HDAC1-210ENST00000490081 DDX41Q9UJV9 622 aaKnown RBP14.18□□□□□ -0.14
HDAC1-210ENST00000490081 MORC2Q9Y6X9 1032 aaPredicted RBP14.18□□□□□ -0.14
HDAC1-210ENST00000490081 VPS37CA5D8V6 355 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-210ENST00000490081 DUSP11O75319 330 aaKnown RBP14.17□□□□□ -0.14
HDAC1-210ENST00000490081 ZNF76P36508 570 aa14.17□□□□□ -0.14
HDAC1-210ENST00000490081 TOB1P50616 345 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-210ENST00000490081 FOSBP53539 338 aa14.17□□□□□ -0.14
HDAC1-210ENST00000490081 TRIM32Q13049 653 aa14.17□□□□□ -0.14
HDAC1-210ENST00000490081 SPRYD3Q8NCJ5 442 aa14.17□□□□□ -0.14
HDAC1-210ENST00000490081 LENG9Q96B70 501 aa14.17□□□□□ -0.14
HDAC1-210ENST00000490081 WDR11Q9BZH6 1224 aa14.17□□□□□ -0.14
HDAC1-210ENST00000490081 KCNH7Q9NS40 1196 aa14.17□□□□□ -0.14
HDAC1-210ENST00000490081 GNEQ9Y223 722 aaKnown RBP14.17□□□□□ -0.14
HDAC1-210ENST00000490081 NFASCO94856 1347 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 FAM205CA6NFA0 338 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 LAD1O00515 517 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 TNFAIP2Q03169 654 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 SEMA3FQ13275 785 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 MTMR1Q13613 665 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 NEDD9Q14511 834 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 LETM2Q2VYF4 491 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 PRAMEF19Q5SWL8 479 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 PRPF38BQ5VTL8 546 aaKnown RBP14.16□□□□□ -0.14
HDAC1-210ENST00000490081 MYSM1Q5VVJ2 828 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 PLA2G4DQ86XP0 818 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 FBXO16Q8IX29 292 aaPredicted RBP14.16□□□□□ -0.14
HDAC1-210ENST00000490081 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 SH3TC2Q8TF17 1288 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 FAM20AQ96MK3 541 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 RIT2Q99578 217 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 KCNMB3Q9NPA1 279 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 TBC1D22BQ9NU19 505 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 RTEL1Q9NZ71 1219 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 ZDHHC9Q9Y397 364 aa14.16□□□□□ -0.14
HDAC1-210ENST00000490081 MYH15Q9Y2K3 1946 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 CCNT1O60563 726 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 BMP15O95972 392 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 F13A1P00488 732 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 TXNP10599 105 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 SMPD1P17405 629 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 LHX8Q68G74 356 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 SEPT14Q6ZU15 432 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 MTMR9Q96QG7 549 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 UPF3AQ9H1J1 476 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 AGO4Q9HCK5 861 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 DDX20Q9UHI6 824 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 DDX25Q9UHL0 483 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 ZHX1Q9UKY1 873 aaPredicted RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
HDAC1-210ENST00000490081 DDX49Q9Y6V7 483 aaKnown RBP14.15□□□□□ -0.14
HDAC1-210ENST00000490081 CENPFP49454 3210 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 IPO5O00410 1097 aaKnown RBP14.14□□□□□ -0.15
HDAC1-210ENST00000490081 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
HDAC1-210ENST00000490081 TDP2O95551 362 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 GJB1P08034 283 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 ARP10275 920 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 CCL5P13501 91 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 KCNA2P16389 499 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 CCND3P30281 292 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-210ENST00000490081 ADCYAP1R1P41586 468 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 GJA9P57773 515 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 SP2Q02086 613 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 LAMC2Q13753 1193 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 PKP1Q13835 747 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 PRR16Q569H4 304 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 TTC38Q5R3I4 469 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 CELF3Q5SZQ8 465 aaKnown RBP14.14□□□□□ -0.15
HDAC1-210ENST00000490081 SLFN12Q8IYM2 578 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 C4orf32Q8N8J7 132 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 ETNPPLQ8TBG4 499 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 SLC5A5Q92911 643 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.14□□□□□ -0.15
HDAC1-210ENST00000490081 ATP6V1DQ9Y5K8 247 aa14.14□□□□□ -0.15
HDAC1-210ENST00000490081 MSH4O15457 936 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 ATP9AO75110 1047 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 ARIH2O95376 493 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 GH1P01241 217 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 RARBP10826 455 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 HOXD8P13378 290 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-210ENST00000490081 CST5P28325 142 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-210ENST00000490081 PRPHP41219 470 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 METTL7BQ6UX53 244 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 B3GNT9Q6UX72 402 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 FERMT3Q86UX7 667 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 UNC93B1Q9H1C4 597 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 POLR3EQ9NVU0 708 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 OGDHLQ9ULD0 1010 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 FRMPD3Q5JV73 1810 aa14.13□□□□□ -0.15
HDAC1-210ENST00000490081 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 A6NJR5 290 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 WNT7AO00755 349 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 ADCY6O43306 1168 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 SLC37A4O43826 429 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms