RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 SPICE1Q8N0Z3 855 aa14.73□□□□□ -0.05
TNXB-206ENST00000490077 CCDC148Q8NFR7 591 aa14.73□□□□□ -0.05
TNXB-206ENST00000490077 DHTKD1Q96HY7 919 aaPredicted RBP14.73□□□□□ -0.05
TNXB-206ENST00000490077 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
TNXB-206ENST00000490077 AKR1B10O60218 316 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 MED24O75448 989 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 GDF11O95390 407 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 POLR2FP61218 127 aaKnown RBP14.72□□□□□ -0.05
TNXB-206ENST00000490077 TLR10Q9BXR5 811 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 RIOX1Q9H6W3 641 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 GGA1Q9UJY5 639 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 AFF2P51816 1311 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 SHMT1P34896 483 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 COASYQ13057 564 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 STIM1Q13586 685 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 TBC1D10BQ4KMP7 808 aaPredicted RBP14.72□□□□□ -0.05
TNXB-206ENST00000490077 TDRD12Q587J7 1177 aaKnown RBP14.72□□□□□ -0.05
TNXB-206ENST00000490077 ARSHQ5FYA8 562 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 MSL1Q68DK7 614 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 SND1Q7KZF4 910 aaKnown RBP eCLIP14.72□□□□□ -0.05
TNXB-206ENST00000490077 KRT25Q7Z3Z0 450 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 HNRNPLLQ8WVV9 542 aaKnown RBP14.72□□□□□ -0.05
TNXB-206ENST00000490077 RAD54LQ92698 747 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 SECISBP2LQ93073 1101 aaKnown RBP14.72□□□□□ -0.05
TNXB-206ENST00000490077 GJD4Q96KN9 370 aaPredicted RBP14.72□□□□□ -0.05
TNXB-206ENST00000490077 CHORDC1Q9UHD1 332 aaPredicted RBP14.72□□□□□ -0.05
TNXB-206ENST00000490077 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 LAMB1P07942 1786 aa14.72□□□□□ -0.05
TNXB-206ENST00000490077 THSD7AQ9UPZ6 1657 aa14.71□□□□□ -0.05
TNXB-206ENST00000490077 PRPF6O94906 941 aaKnown RBP14.71□□□□□ -0.05
TNXB-206ENST00000490077 GLI1P08151 1106 aa14.71□□□□□ -0.05
TNXB-206ENST00000490077 SLC9A1P19634 815 aa14.71□□□□□ -0.05
TNXB-206ENST00000490077 TSR1Q2NL82 804 aaKnown RBP14.71□□□□□ -0.05
TNXB-206ENST00000490077 KIAA0825Q8IV33 1275 aa14.71□□□□□ -0.05
TNXB-206ENST00000490077 ZSCAN29Q8IWY8 852 aaPredicted RBP14.71□□□□□ -0.05
TNXB-206ENST00000490077 SH2D3AQ9BRG2 576 aa14.71□□□□□ -0.05
TNXB-206ENST00000490077 USP40Q9NVE5 1235 aa14.71□□□□□ -0.05
TNXB-206ENST00000490077 ADAMTS1Q9UHI8 967 aa14.71□□□□□ -0.05
TNXB-206ENST00000490077 A0A087X0T9 212 aa14.71□□□□□ -0.06
TNXB-206ENST00000490077 DDTLA6NHG4 134 aaPredicted RBP14.71□□□□□ -0.06
TNXB-206ENST00000490077 FAM228BP0C875 321 aa14.71□□□□□ -0.06
TNXB-206ENST00000490077 KLRC1P26715 233 aa14.71□□□□□ -0.06
TNXB-206ENST00000490077 HOXD13P35453 343 aa14.71□□□□□ -0.06
TNXB-206ENST00000490077 RRP1BQ14684 758 aaKnown RBP14.71□□□□□ -0.06
TNXB-206ENST00000490077 CT47A1Q5JQC4 288 aaPredicted RBP14.71□□□□□ -0.06
TNXB-206ENST00000490077 CCNI2Q6ZMN8 369 aaPredicted RBP14.71□□□□□ -0.06
TNXB-206ENST00000490077 FAM133AQ8N9E0 248 aa14.71□□□□□ -0.06
TNXB-206ENST00000490077 DDX25Q9UHL0 483 aaKnown RBP14.71□□□□□ -0.06
TNXB-206ENST00000490077 PLAGL2Q9UPG8 496 aa14.71□□□□□ -0.06
TNXB-206ENST00000490077 CCDC88AQ3V6T2 1871 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 ROBO3Q96MS0 1386 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 EIF3CLB5ME19 914 aaKnown RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 CASP4P49662 377 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 ADCY7P51828 1080 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 VAV2P52735 878 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 KIF5AQ12840 1032 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 PABPC4Q13310 644 aaKnown RBP eCLIP14.7□□□□□ -0.06
TNXB-206ENST00000490077 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 CALML4Q96GE6 196 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 CDK5RAP3Q96JB5 506 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 EIF3CQ99613 913 aaKnown RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 DEF6Q9H4E7 631 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 SH2D4AQ9H788 454 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 FEZ2Q9UHY8 353 aaPredicted RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 BTAF1O14981 1849 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 MYH1P12882 1939 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 MAGEA1P43355 309 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 CARSP49589 748 aaKnown RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 GUCY2FP51841 1108 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 SF3A3Q12874 501 aaKnown RBP eCLIP14.7□□□□□ -0.06
TNXB-206ENST00000490077 KLHDC7AQ5VTJ3 777 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 CCDC84Q86UT8 332 aaPredicted RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 SIAH1Q8IUQ4 282 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 SPATA4Q8NEY3 305 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 PURBQ96QR8 312 aaKnown RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 ERGIC2Q96RQ1 377 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 OSBPL9Q96SU4 736 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.7□□□□□ -0.06
TNXB-206ENST00000490077 LSM14BQ9BX40 385 aaKnown RBP14.7□□□□□ -0.06
TNXB-206ENST00000490077 LEMD3Q9Y2U8 911 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 CDK5RAP2Q96SN8 1893 aa14.7□□□□□ -0.06
TNXB-206ENST00000490077 CLIC2O15247 247 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 KRT86O43790 486 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 PRPHP41219 470 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 GNAQP50148 359 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 GABPAQ06546 454 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 DDX42Q86XP3 938 aaKnown RBP eCLIP14.69□□□□□ -0.06
TNXB-206ENST00000490077 SCFD1Q8WVM8 642 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 RGL1Q9NZL6 768 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 SNX12Q9UMY4 172 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 MYH7BA7E2Y1 1941 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 KRT14P02533 472 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 CDC42EP5Q6NZY7 148 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 UNC13DQ70J99 1090 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 CDAN1Q8IWY9 1227 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 BRCA2P51587 3418 aa14.69□□□□□ -0.06
TNXB-206ENST00000490077 MARCH6O60337 910 aa14.68□□□□□ -0.06
TNXB-206ENST00000490077 GNA11P29992 359 aa14.68□□□□□ -0.06
TNXB-206ENST00000490077 COPB2P35606 906 aa14.68□□□□□ -0.06
TNXB-206ENST00000490077 EHHADHQ08426 723 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms