RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PARVGQ9HBI0 331 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ANGPTL3Q9Y5C1 460 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 SKIP12755 728 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 CPA1P15085 419 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 NR2F2P24468 414 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MSH2P43246 934 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 IRX5P78411 483 aaPredicted RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 ZNF496Q96IT1 587 aaPredicted RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MMS19Q96T76 1030 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MYCBPQ99417 103 aaPredicted RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 CPSF3Q9UKF6 684 aaKnown RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 RCOR1Q9UKL0 485 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 IFNAR1P17181 557 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MAPK4P31152 587 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 STAT2P52630 851 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 BLZF1Q9H2G9 400 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 CHD1O14646 1710 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 CLGNO14967 610 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 ECEL1O95672 775 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 ZSCAN20P17040 1043 aaPredicted RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 OSBPP22059 807 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 KRT24Q2M2I5 525 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 FMO2Q99518 471 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 SGK1O00141 431 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 CPP00450 1065 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 TRPV6Q9H1D0 765 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 ABCA8O94911 1581 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 JADE1Q6IE81 842 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 PPP1R18Q6NYC8 613 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MICAL1Q8TDZ2 1067 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 ITSN1Q15811 1721 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 ESYT2A0FGR8 921 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MIF4GDA9UHW6 222 aaKnown RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 TAF5LO75529 589 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 TJP3O95049 919 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MMP1P03956 469 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 A1BGP04217 495 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 ARL4AP40617 200 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 LSG1Q9H089 658 aaKnown RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 THRAP3Q9Y2W1 955 aaKnown RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 PCDHB4Q9Y5E5 795 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 PRPF3O43395 683 aaKnown RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 FAM186BQ8IYM0 893 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 TTLL3Q9Y4R7 772 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 GUCY2FP51841 1108 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 SLFN13Q68D06 897 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 TRMT2AQ8IZ69 625 aaKnown RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 CFAP61Q8NHU2 1237 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 TACO1Q9BSH4 297 aaKnown RBP9.58□□□□□ -0.88
LSAMP-205ENST00000490035 NBPF3Q9H094 633 aa9.58□□□□□ -0.88
LSAMP-205ENST00000490035 MAPK13O15264 365 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 IFNA8P32881 189 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SCRN1Q12765 414 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 AP3B2Q13367 1082 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 MAEAQ7L5Y9 396 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 TTC16Q8NEE8 873 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 CABLES1Q8TDN4 633 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 ZNF577Q9BSK1 485 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 UGGT1Q9NYU2 1555 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 HNRNPDLO14979 420 aaKnown RBP9.57□□□□□ -0.88
LSAMP-205ENST00000490035 CHEK2O96017 543 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 GUCY2DQ02846 1103 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 KYAT1Q16773 422 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SGO2Q562F6 1265 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SPOUT1Q5T280 376 aaKnown RBP9.57□□□□□ -0.88
LSAMP-205ENST00000490035 KIAA1024Q9UPX6 916 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SERPINB6P35237 376 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 STK38LQ9Y2H1 464 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 RIPOR2Q9Y4F9 1068 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SPATA31E1Q6ZUB1 1445 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 H7C0C1 242 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 AP3B1O00203 1094 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 ATP5OP48047 213 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 DCPSQ96C86 337 aaKnown RBP9.57□□□□□ -0.88
LSAMP-205ENST00000490035 GCOM2Q9BZD3 368 aaPredicted RBP9.57□□□□□ -0.88
LSAMP-205ENST00000490035 NDE1Q9NXR1 346 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 TRIM33Q9UPN9 1127 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 GTF2IP78347 998 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 PDE1BQ01064 536 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 TEDDM1Q5T9Z0 273 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SCYL2Q6P3W7 929 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 RAPH1Q70E73 1250 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 TCP11Q8WWU5 503 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 UPF3AQ9H1J1 476 aaKnown RBP9.57□□□□□ -0.88
LSAMP-205ENST00000490035 ANKFY1Q9P2R3 1169 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 TLK1Q9UKI8 766 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 PTCH1Q13635 1447 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 A0A0D9SFI3 127 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 GGPS1O95749 300 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 IQCB1Q15051 598 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SULF1Q8IWU6 871 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 PRDM1O75626 825 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 CENPUQ71F23 418 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 ANKRD42Q8N9B4 389 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 PDZD8Q8NEN9 1154 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 KIF2CQ99661 725 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SLAIN2Q9P270 581 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 SEL1LQ9UBV2 794 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 STRIP2Q9ULQ0 834 aa9.57□□□□□ -0.88
LSAMP-205ENST00000490035 PACSIN2Q9UNF0 486 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms