RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 STEAP3Q658P3 488 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 CD300LDQ6UXZ3 194 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 TTLL7Q6ZT98 887 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGN1-218ENST00000490032 CHAMP1Q96JM3 812 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 SYT3Q9BQG1 590 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 EPB41L1Q9H4G0 881 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 TCRBV5S2A0A599 114 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 MSCO60682 206 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 DGKIO75912 1065 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 RPL13P26373 211 aaKnown RBP6.11□□□□□ -1.43
HMGN1-218ENST00000490032 SKOR2Q2VWA4 1001 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-218ENST00000490032 PRR31Q5SQ13 230 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 ZNF761Q86XN6 746 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-218ENST00000490032 TTLL6Q8N841 843 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 PHOSPHO1Q8TCT1 267 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 OSBP2Q969R2 916 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 PCDHB4Q9Y5E5 795 aa6.11□□□□□ -1.43
HMGN1-218ENST00000490032 PRICKLE3O43900 615 aaPredicted RBP6.1□□□□□ -1.43
HMGN1-218ENST00000490032 STK10O94804 968 aaKnown RBP6.1□□□□□ -1.43
HMGN1-218ENST00000490032 STAT5AP42229 794 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 NTRK3Q16288 839 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 ERICH6BQ5W0A0 696 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 CYP4F22Q6NT55 531 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 USP53Q70EK8 1073 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 CKAP2LQ8IYA6 745 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 LRRC47Q8N1G4 583 aaKnown RBP6.1□□□□□ -1.43
HMGN1-218ENST00000490032 ARRDC4Q8NCT1 418 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 DCAF4Q8WV16 495 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 PHF20Q9BVI0 1012 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 SMOC1Q9H4F8 434 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 PODXL2Q9NZ53 605 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 DTLQ9NZJ0 730 aa6.1□□□□□ -1.43
HMGN1-218ENST00000490032 PRODHO43272 600 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 CELA3BP08861 270 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 PABPC1P11940 636 aaKnown RBP6.09□□□□□ -1.43
HMGN1-218ENST00000490032 GJA9P57773 515 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 NKX3-2P78367 333 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 ADAM9Q13443 819 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 RTP5Q14D33 572 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 ADAMTS17Q8TE56 1095 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 TOE1Q96GM8 510 aaKnown RBP6.09□□□□□ -1.43
HMGN1-218ENST00000490032 ZFYVE21Q9BQ24 234 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 TRIM55Q9BYV6 548 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 LNPKQ9C0E8 428 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 USP40Q9NVE5 1235 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
HMGN1-218ENST00000490032 TRAV20A0A0B4J274 112 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 MAFKO60675 156 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 FAM26FQ5R3K3 315 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 NBPF6Q5VWK0 638 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 STYK1Q6J9G0 422 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 TEPPQ6URK8 271 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 NSMFQ6X4W1 530 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 LBX2Q6XYB7 198 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 NBPF4Q96M43 638 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 YIPF4Q9BSR8 244 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 SLC6A20Q9NP91 592 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 MYOTQ9UBF9 498 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 PPARGC1AQ9UBK2 798 aaKnown RBP6.08□□□□□ -1.44
HMGN1-218ENST00000490032 ASH2LQ9UBL3 628 aa6.08□□□□□ -1.44
HMGN1-218ENST00000490032 KRIT1O00522 736 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 LRG1P02750 347 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 RASGRF1Q13972 1273 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 UBXN11Q5T124 520 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 YOD1Q5VVQ6 348 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-218ENST00000490032 KCNT2Q6UVM3 1135 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 STK32CQ86UX6 486 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 TTLL11Q8NHH1 800 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 C8orf37Q96NL8 207 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 SPATA9Q9BWV2 254 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 JAM3Q9BX67 310 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 PDGFDQ9GZP0 370 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-218ENST00000490032 CCDC113Q9H0I3 377 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 CNOT11Q9UKZ1 510 aaKnown RBP6.07□□□□□ -1.44
HMGN1-218ENST00000490032 DUSP10Q9Y6W6 482 aa6.07□□□□□ -1.44
HMGN1-218ENST00000490032 PDPK1O15530 556 aa6.06□□□□□ -1.44
HMGN1-218ENST00000490032 ADCY3O60266 1144 aa6.06□□□□□ -1.44
HMGN1-218ENST00000490032 GPR85P60893 370 aa6.06□□□□□ -1.44
HMGN1-218ENST00000490032 IFRD2Q12894 506 aaPredicted RBP6.06□□□□□ -1.44
HMGN1-218ENST00000490032 KIZQ2M2Z5 673 aa6.06□□□□□ -1.44
HMGN1-218ENST00000490032 HABP4Q5JVS0 413 aaKnown RBP6.06□□□□□ -1.44
HMGN1-218ENST00000490032 OTOP3Q7RTS5 596 aa6.06□□□□□ -1.44
HMGN1-218ENST00000490032 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGN1-218ENST00000490032 PIP4K2CQ8TBX8 421 aa6.06□□□□□ -1.44
HMGN1-218ENST00000490032 U2SURPO15042 1029 aaKnown RBP6.05□□□□□ -1.44
HMGN1-218ENST00000490032 ZNF28P17035 718 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 ATP2B1P20020 1258 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 GRK2P25098 689 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 GRK3P35626 688 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 EFEMP1Q12805 493 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 RGL3Q3MIN7 710 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 SPATC1Q76KD6 591 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 DPH6Q7L8W6 267 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 FERMT3Q86UX7 667 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 TRIM48Q8IWZ4 208 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 IFNL3Q8IZI9 196 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 UHMK1Q8TAS1 419 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms