RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PTK7Q13308 1070 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 SEC23AQ15436 765 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 MYSM1Q5VVJ2 828 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 STOX1Q6ZVD7 989 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 CYB5R4Q7L1T6 521 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 WNT8BQ93098 351 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 MTMR8Q96EF0 704 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 MAD2L2Q9UI95 211 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 COG5Q9UP83 839 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 PCDHA1Q9Y5I3 950 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 MYH6P13533 1939 aa18.45■□□□□ 0.54
PLOD3-216ENST00000489927 TCF20Q9UGU0 1960 aaKnown RBP18.45■□□□□ 0.54
PLOD3-216ENST00000489927 GJB5O95377 273 aa18.45■□□□□ 0.54
PLOD3-216ENST00000489927 HOXD8P13378 290 aaPredicted RBP18.45■□□□□ 0.54
PLOD3-216ENST00000489927 ZNF200P98182 395 aaPredicted RBP18.45■□□□□ 0.54
PLOD3-216ENST00000489927 HIC1Q14526 733 aa18.45■□□□□ 0.54
PLOD3-216ENST00000489927 TRIM71Q2Q1W2 868 aaKnown RBP18.45■□□□□ 0.54
PLOD3-216ENST00000489927 HSDL1Q3SXM5 330 aa18.45■□□□□ 0.54
PLOD3-216ENST00000489927 ZNF618Q5T7W0 954 aa18.45■□□□□ 0.54
PLOD3-216ENST00000489927 TRAF7Q6Q0C0 670 aa18.45■□□□□ 0.54
PLOD3-216ENST00000489927 IL31RAQ8NI17 732 aa18.45■□□□□ 0.54
PLOD3-216ENST00000489927 MAP3K20Q9NYL2 800 aaKnown RBP18.45■□□□□ 0.54
PLOD3-216ENST00000489927 COL4A4P53420 1690 aaPredicted RBP18.44■□□□□ 0.54
PLOD3-216ENST00000489927 ABHD14A-ACY1A0A1B0GW23 586 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 PALM3A6NDB9 673 aaPredicted RBP18.44■□□□□ 0.54
PLOD3-216ENST00000489927 PPFIA4O75335 1185 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 SP2Q02086 613 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 MBTPS1Q14703 1052 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 PGM5Q15124 567 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 SLC35G1Q2M3R5 365 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 CELF3Q5SZQ8 465 aaKnown RBP18.44■□□□□ 0.54
PLOD3-216ENST00000489927 KCNV1Q6PIU1 500 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 HOMER1Q86YM7 354 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 HLA-CQ95604 372 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 SPATA33Q96N06 139 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 MTUS1Q9ULD2 1270 aa18.44■□□□□ 0.54
PLOD3-216ENST00000489927 GGPS1O95749 300 aa18.43■□□□□ 0.54
PLOD3-216ENST00000489927 IKBKEQ14164 716 aa18.43■□□□□ 0.54
PLOD3-216ENST00000489927 EXOC6Q8TAG9 804 aa18.43■□□□□ 0.54
PLOD3-216ENST00000489927 GDPD5Q8WTR4 605 aa18.43■□□□□ 0.54
PLOD3-216ENST00000489927 ZFP91Q96JP5 570 aaPredicted RBP18.43■□□□□ 0.54
PLOD3-216ENST00000489927 RAD9AQ99638 391 aa18.43■□□□□ 0.54
PLOD3-216ENST00000489927 NCOR1O75376 2440 aa18.42■□□□□ 0.54
PLOD3-216ENST00000489927 EFCAB14O75071 495 aa18.42■□□□□ 0.54
PLOD3-216ENST00000489927 UBA1P22314 1058 aaKnown RBP18.42■□□□□ 0.54
PLOD3-216ENST00000489927 FAM117BQ6P1L5 589 aa18.42■□□□□ 0.54
PLOD3-216ENST00000489927 SAMD3Q8N6K7 520 aa18.42■□□□□ 0.54
PLOD3-216ENST00000489927 GPKOWQ92917 476 aaPredicted RBP eCLIP18.42■□□□□ 0.54
PLOD3-216ENST00000489927 PIGSQ96S52 555 aa18.42■□□□□ 0.54
PLOD3-216ENST00000489927 C16orf70Q9BSU1 422 aa18.42■□□□□ 0.54
PLOD3-216ENST00000489927 SUGCTQ9HAC7 445 aa18.42■□□□□ 0.54
PLOD3-216ENST00000489927 LINC01553A4QN01 128 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 GCOM1H8Y6P7 765 aaPredicted RBP18.41■□□□□ 0.54
PLOD3-216ENST00000489927 LGR5O75473 907 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 POLR2MP0CAP2 368 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 TGFB3P10600 412 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 CCND2P30279 289 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 ERVK-21P61565 698 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 GRM4Q14833 912 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.41■□□□□ 0.54
PLOD3-216ENST00000489927 TGS1Q96RS0 853 aaKnown RBP18.41■□□□□ 0.54
PLOD3-216ENST00000489927 RIOX1Q9H6W3 641 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 LMCD1Q9NZU5 365 aa18.41■□□□□ 0.54
PLOD3-216ENST00000489927 THPOP40225 353 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 TRDNQ13061 729 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 SERINC5Q86VE9 423 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 FCHSD1Q86WN1 690 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 C1QTNF1Q9BXJ1 281 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 BCAS3Q9H6U6 928 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 MLXIPQ9HAP2 919 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 SENP2Q9HC62 589 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 EMSYQ7Z589 1322 aa18.4■□□□□ 0.54
PLOD3-216ENST00000489927 MYH7BA7E2Y1 1941 aa18.39■□□□□ 0.53
PLOD3-216ENST00000489927 RSPH10B2B2RC85 870 aa18.39■□□□□ 0.53
PLOD3-216ENST00000489927 CYTH3O43739 400 aa18.39■□□□□ 0.53
PLOD3-216ENST00000489927 CYP21A2P08686 494 aa18.39■□□□□ 0.53
PLOD3-216ENST00000489927 RSPH10BP0C881 870 aa18.39■□□□□ 0.53
PLOD3-216ENST00000489927 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
PLOD3-216ENST00000489927 TRAF1Q13077 416 aa18.39■□□□□ 0.53
PLOD3-216ENST00000489927 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
PLOD3-216ENST00000489927 DBF4BQ8NFT6 615 aa18.39■□□□□ 0.53
PLOD3-216ENST00000489927 PNMA6FA0A0J9YX94 578 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 C17orf102A2RUQ5 167 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 H3BRB1 525 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 IFIT3O14879 490 aaKnown RBP18.38■□□□□ 0.53
PLOD3-216ENST00000489927 LGALS2P05162 132 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 PDE4AP27815 886 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 HOXC8P31273 242 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 TROAPQ12815 778 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 ATP6V0A1Q93050 837 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 TUT1Q9H6E5 874 aaKnown RBP18.38■□□□□ 0.53
PLOD3-216ENST00000489927 TAF6LQ9Y6J9 622 aa18.38■□□□□ 0.53
PLOD3-216ENST00000489927 ERICH2A1L162 156 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 AMHP03971 560 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 SMIM10L2AP0DMW4 78 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 SMIM10L2BP0DMW5 78 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 MRPS9P82933 396 aaKnown RBP18.37■□□□□ 0.53
PLOD3-216ENST00000489927 PTH1RQ03431 593 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 PLEKHG4Q58EX7 1191 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms