RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.3
TRIM40-208ENST00000489892 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.3
TRIM40-208ENST00000489892 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
TRIM40-208ENST00000489892 TCEAL9Q9UHQ7 104 aa13.15□□□□□ -0.3
TRIM40-208ENST00000489892 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 BTBD19C9JJ37 291 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 MAFGO15525 162 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 ZNF202O95125 648 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 ERVK-24P63145 666 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 PRR16Q569H4 304 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 HAUS3Q68CZ6 603 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 NLRX1Q86UT6 975 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 NCAPG2Q86XI2 1143 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 CEP57L1Q8IYX8 460 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 CALML4Q96GE6 196 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 CLIC6Q96NY7 704 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 CCSER1Q9C0I3 900 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
TRIM40-208ENST00000489892 PXMP2Q9NR77 195 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 MORF4L1Q9UBU8 362 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 PCDHA12Q9UN75 941 aa13.14□□□□□ -0.31
TRIM40-208ENST00000489892 KDM3AQ9Y4C1 1321 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 WNT7AO00755 349 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 SLC37A4O43826 429 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 MYL1P05976 194 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 FCER1AP12319 257 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 TXKP42681 527 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 PKN2Q16513 984 aaKnown RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 KRT79Q5XKE5 535 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 SLC30A10Q6XR72 485 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 ABRAQ8N0Z2 381 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 IGSF22Q8N9C0 903 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 CNNM3Q8NE01 707 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 MOV10L1Q9BXT6 1211 aaKnown RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 GOLPH3LQ9H4A5 285 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
TRIM40-208ENST00000489892 BTBD7Q9P203 1132 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 RBPJLQ9UBG7 517 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 LRWD1Q9UFC0 647 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 RIPK3Q9Y572 518 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 SMCHD1A6NHR9 2005 aa13.13□□□□□ -0.31
TRIM40-208ENST00000489892 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 MEIS1O00470 390 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 STRNO43815 780 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 TBC1D8O95759 1140 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 ALDH1A1P00352 501 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 ERCC3P19447 782 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 PGM5Q15124 567 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 RBM43Q6ZSC3 357 aaKnown RBP13.12□□□□□ -0.31
TRIM40-208ENST00000489892 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
TRIM40-208ENST00000489892 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 GPRASP2Q96D09 838 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 MMP19Q99542 508 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 RIT2Q99578 217 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 LRRC27Q9C0I9 530 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 NT5C3AQ9H0P0 336 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 IVNS1ABPQ9Y6Y0 642 aa13.12□□□□□ -0.31
TRIM40-208ENST00000489892 IGLV3-22A0A075B6J6 115 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 FAM86B1E9PN63 330 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 POLR2DO15514 142 aaKnown RBP13.11□□□□□ -0.31
TRIM40-208ENST00000489892 CNMDO75829 334 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 SMC2O95347 1197 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 FAM86B2P0C5J1 330 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 TAL1P17542 331 aaPredicted RBP13.11□□□□□ -0.31
TRIM40-208ENST00000489892 MAPK4P31152 587 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 STAT6P42226 847 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 TECP42680 631 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 SEMA3FQ13275 785 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 RRAGBQ5VZM2 374 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 ETNPPLQ8TBG4 499 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
TRIM40-208ENST00000489892 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 DISC1Q9NRI5 854 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 TBC1D22BQ9NU19 505 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 SLC5A4Q9NY91 659 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 COL20A1Q9P218 1284 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 STK17AQ9UEE5 414 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
TRIM40-208ENST00000489892 GAS7O60861 476 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 NR3C2P08235 984 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 CYP2C8P10632 490 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 EIF2AK2P19525 551 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms