RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 FAM114A1Q8IWE2 563 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GBP7Q8N8V2 638 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ANKS4BQ8N8V4 417 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CCDC197Q8NCU1 140 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SPATA4Q8NEY3 305 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 WHAMMQ8TF30 809 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 HDAC7Q8WUI4 952 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 MAIP1Q8WWC4 291 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 AIDAQ96BJ3 306 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CENPTQ96BT3 561 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 C8orf76Q96K31 380 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TRAPPC9Q96Q05 1148 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 HINFPQ9BQA5 517 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 VCXQ9H320 206 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 TAF1DQ9H5J8 278 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 DMAP1Q9NPF5 467 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GDF3Q9NR23 364 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 ATXN10Q9UBB4 475 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 SLC12A6Q9UHW9 1150 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 CEP131Q9UPN4 1083 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 REXO2Q9Y3B8 237 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 GMEB1Q9Y692 573 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 MAP3K15Q6ZN16 1313 aa5.25□□□□□ -1.57
SNRNP40-206ENST00000489853 KIF1BO60333 1816 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 DLG5Q8TDM6 1919 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 A0A0D9SFI3 127 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 A0A1B0GVG6 124 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 GCOM1H8Y6P7 765 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 CYP27B1O15528 508 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ASAP2O43150 1006 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ATP2C2O75185 946 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 WFS1O76024 890 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 DXOO77932 396 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 STAU1O95793 577 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 BAG3O95817 575 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 A1BGP04217 495 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 MYZAPP0CAP1 466 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ATP2A2P16615 1042 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 PDIA3P30101 505 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 CDC25CP30307 473 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 PDE6BP35913 854 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 SEC13P55735 322 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ARHGAP4P98171 946 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ADAM9Q13443 819 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 TMED1Q13445 227 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 RRS1Q15050 365 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ENOX2Q16206 610 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 Q4G0T1 1027 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 AGBL2Q5U5Z8 902 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 CDKAL1Q5VV42 579 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ANO7Q6IWH7 933 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 SH3BP5LQ7L8J4 393 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ZBTB33Q86T24 672 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 TBC1D1Q86TI0 1168 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 LARGE2Q8N3Y3 721 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 EIF1ADQ8N9N8 165 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 RAPGEF5Q92565 580 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 OPTNQ96CV9 577 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 AGAP3Q96P47 875 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 MED15Q96RN5 788 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 SEC62Q99442 399 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM167BQ9BTA0 163 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 PLCB1Q9NQ66 1216 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 JADE2Q9NQC1 790 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 MIS18AQ9NYP9 233 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 SUN2Q9UH99 717 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 KCNH3Q9ULD8 1083 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 TMCO1Q9UM00 188 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF510Q9Y2H8 683 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 PCDHGA11Q9Y5H2 935 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 CARMIL3Q8ND23 1372 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ARHGAP5Q13017 1502 aa5.24□□□□□ -1.57
SNRNP40-206ENST00000489853 ADGRB3O60242 1522 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 CRB1P82279 1406 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 MROH7-TTC4A0A0A0MT08 1334 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 F8W031 263 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 M0R2C6 588 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF185O15231 689 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 GSTA2P09210 222 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 IDEP14735 1019 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 DESP17661 470 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 TCP1P17987 556 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 EIF2S2P20042 333 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ATP6V1C1P21283 382 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 MARCKSP29966 332 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 KRT9P35527 623 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 HSPA9P38646 679 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PAFAH1B1P43034 410 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SCNN1BP51168 640 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PPP2R2AP63151 447 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PABPC4Q13310 644 aaKnown RBP eCLIP5.23□□□□□ -1.572e-12■■■■□ 21.4
SNRNP40-206ENST00000489853 POSTNQ15063 836 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 EZH2Q15910 746 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 TSNAXIP1Q2TAA8 658 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 MAP7D1Q3KQU3 841 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 C9orf131Q5VYM1 1079 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 MCM10Q7L590 875 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PIGWQ7Z7B1 504 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIM50Q86XT4 487 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms