RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 DEXIO95424 95 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 UBA1P22314 1058 aaKnown RBP18.02■□□□□ 0.48
LMX1A-204ENST00000489443 CDK7P50613 346 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 CHMP4BP1P59074 171 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 ITGA7Q13683 1181 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 ME3Q16798 604 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 CELF3Q5SZQ8 465 aaKnown RBP18.02■□□□□ 0.48
LMX1A-204ENST00000489443 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 ANKRD33Q7Z3H0 272 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 SH3RF1Q7Z6J0 888 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 NLRX1Q86UT6 975 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 CCDC148Q8NFR7 591 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 MTG1Q9BT17 334 aaPredicted RBP18.02■□□□□ 0.48
LMX1A-204ENST00000489443 ANO3Q9BYT9 981 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 MLXIPQ9HAP2 919 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.48
LMX1A-204ENST00000489443 COLQQ9Y215 455 aaPredicted RBP18.02■□□□□ 0.48
LMX1A-204ENST00000489443 GRIN2DO15399 1336 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 DOCK5Q9H7D0 1870 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 ADAMTS3O15072 1205 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 FIBPO43427 364 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 LARGE1O95461 756 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 MMP3P08254 477 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 CLTBP09497 229 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 GNA11P29992 359 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 ICAM3P32942 547 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 CLK2P49760 499 aaKnown RBP18.01■□□□□ 0.47
LMX1A-204ENST00000489443 SEMA3FQ13275 785 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 AP3B2Q13367 1082 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 REXO1Q8N1G1 1221 aaKnown RBP18.01■□□□□ 0.47
LMX1A-204ENST00000489443 EMID1Q96A84 441 aaPredicted RBP18.01■□□□□ 0.47
LMX1A-204ENST00000489443 SPATA33Q96N06 139 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 TOX2Q96NM4 488 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 KIF2CQ99661 725 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 BCAS3Q9H6U6 928 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 PDLIM7Q9NR12 457 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 SH3GLB2Q9NR46 395 aa18.01■□□□□ 0.47
LMX1A-204ENST00000489443 MROH7Q68CQ1 1323 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 ITGB5P18084 799 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 MAGEA10P43363 369 aaPredicted RBP18■□□□□ 0.47
LMX1A-204ENST00000489443 NLRP5P59047 1200 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
LMX1A-204ENST00000489443 FAAP100Q0VG06 881 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 DGKDQ16760 1214 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 CYFIP1Q7L576 1253 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 SLC43A3Q8NBI5 491 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 PPTC7Q8NI37 304 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 BICD2Q8TD16 824 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 PPP1R13LQ8WUF5 828 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 AIFM3Q96NN9 605 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 LBHD1Q9BQE6 289 aaPredicted RBP18■□□□□ 0.47
LMX1A-204ENST00000489443 TMEM39AQ9NV64 488 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 UBIAD1Q9Y5Z9 338 aa18■□□□□ 0.47
LMX1A-204ENST00000489443 TRIM43BA6NCK2 446 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 ZNF76P36508 570 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
LMX1A-204ENST00000489443 NEDD9Q14511 834 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 NBPF20Q3BBV1 942 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 FAM47CQ5HY64 1035 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 RASGRP4Q8TDF6 673 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 TRIM43Q96BQ3 446 aaPredicted RBP17.99■□□□□ 0.47
LMX1A-204ENST00000489443 GPRASP2Q96D09 838 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 PKD2L1Q9P0L9 805 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 SCN10AQ9Y5Y9 1956 aa17.99■□□□□ 0.47
LMX1A-204ENST00000489443 TLR3O15455 904 aaKnown RBP17.98■□□□□ 0.47
LMX1A-204ENST00000489443 CTDNEP1O95476 244 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 SREBF1P36956 1147 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 ARHGAP4P98171 946 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 MTMR1Q13613 665 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 MCTP2Q6DN12 878 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 FAM126BQ8IXS8 530 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 CYP2W1Q8TAV3 490 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 GTF3C6Q969F1 213 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 CDHR1Q96JP9 859 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 GDF15Q99988 308 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 SENP7Q9BQF6 1050 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 MXRA8Q9BRK3 442 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 SEZ6LQ9BYH1 1024 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 TRPV6Q9H1D0 765 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 JADE2Q9NQC1 790 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 ORC3Q9UBD5 711 aaPredicted RBP17.98■□□□□ 0.47
LMX1A-204ENST00000489443 LIMCH1Q9UPQ0 1083 aa17.98■□□□□ 0.47
LMX1A-204ENST00000489443 NOP56O00567 594 aaKnown RBP17.97■□□□□ 0.47
LMX1A-204ENST00000489443 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 ATP9AO75110 1047 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 PPFIA4O75335 1185 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 ZNF286BP0CG31 522 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 RAG1P15918 1043 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 SP4Q02446 784 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 METTL7BQ6UX53 244 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 STK36Q9NRP7 1315 aa17.97■□□□□ 0.47
LMX1A-204ENST00000489443 CD4P01730 458 aa17.96■□□□□ 0.47
LMX1A-204ENST00000489443 CEP55Q53EZ4 464 aa17.96■□□□□ 0.47
LMX1A-204ENST00000489443 GIMAP8Q8ND71 665 aaPredicted RBP17.96■□□□□ 0.47
LMX1A-204ENST00000489443 KAT2BQ92831 832 aa17.96■□□□□ 0.47
LMX1A-204ENST00000489443 BADQ92934 168 aa17.96■□□□□ 0.47
LMX1A-204ENST00000489443 UBE2OQ9C0C9 1292 aaKnown RBP17.96■□□□□ 0.47
LMX1A-204ENST00000489443 KCNH7Q9NS40 1196 aa17.96■□□□□ 0.47
LMX1A-204ENST00000489443 PCDHA4Q9UN74 947 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms