RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TPRP12270 2363 aaKnown RBP10.95□□□□□ -0.66
SSBP1-212ENST00000489378 CKBP12277 381 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 BMP3P12645 472 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 ADD2P35612 726 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 ZXDAP98168 799 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 MBTPS1Q14703 1052 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 TKFCQ3LXA3 575 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 NSMFQ6X4W1 530 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 CHMP4CQ96CF2 233 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 TLR9Q9NR96 1032 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 SLC4A4Q9Y6R1 1079 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 NCOR2Q9Y618 2525 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 NLRC5Q86WI3 1866 aa10.95□□□□□ -0.66
SSBP1-212ENST00000489378 KPNA6O60684 536 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 EFCAB14O75071 495 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 TBX10O75333 385 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 FDX1P10109 184 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 ALDH5A1P51649 535 aaPredicted RBP10.94□□□□□ -0.66
SSBP1-212ENST00000489378 RBL2Q08999 1139 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 HYAL1Q12794 435 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 SMAD4Q13485 552 aaKnown RBP10.94□□□□□ -0.66
SSBP1-212ENST00000489378 BRDTQ58F21 947 aaPredicted RBP10.94□□□□□ -0.66
SSBP1-212ENST00000489378 SLFN13Q68D06 897 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
SSBP1-212ENST00000489378 MYOCDQ8IZQ8 938 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 GMCL1P1Q8NEA9 526 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 MKL1Q969V6 931 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 CEP95Q96GE4 821 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 SAMD11Q96NU1 681 aa10.94□□□□□ -0.66
SSBP1-212ENST00000489378 TSR3Q9UJK0 312 aaKnown RBP10.94□□□□□ -0.66
SSBP1-212ENST00000489378 ISY1Q9ULR0 285 aaKnown RBP10.94□□□□□ -0.66
SSBP1-212ENST00000489378 RAD50Q92878 1312 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 PROB1E7EW31 1015 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 PARNO95453 639 aaKnown RBP10.93□□□□□ -0.66
SSBP1-212ENST00000489378 AVPR2P30518 371 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 GTF2F1P35269 517 aaKnown RBP eCLIP10.93□□□□□ -0.66
SSBP1-212ENST00000489378 STAT2P52630 851 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 TMEM192Q8IY95 271 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 WNT8BQ93098 351 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 MKNK2Q9HBH9 465 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 MTMR4Q9NYA4 1195 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 WDR87Q6ZQQ6 2873 aa10.93□□□□□ -0.66
SSBP1-212ENST00000489378 PRR23AA6NEV1 266 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 LINC01565O15544 149 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 NCK2O43639 380 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 LGR5O75473 907 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 KRT37O76014 449 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 AMHP03971 560 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 ID4P47928 161 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 PRSS12P56730 875 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 IKQ13123 557 aaPredicted RBP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 BAATQ14032 418 aaPredicted RBP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 PPP2R5BQ15173 497 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 TRIM71Q2Q1W2 868 aaKnown RBP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 ZNF618Q5T7W0 954 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 SESTD1Q86VW0 696 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 FBXO11Q86XK2 927 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 TMEM57Q8N5G2 664 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 STAG1Q8WVM7 1258 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 KAT2BQ92831 832 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 ASIC4Q96FT7 647 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 IRF2BPLQ9H1B7 796 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 ARPP21Q9UBL0 812 aaPredicted RBP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 CD207Q9UJ71 328 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 EP300Q09472 2414 aaPredicted RBP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 LOC730098B7Z3J9 87 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 NKRFO15226 690 aaKnown RBP eCLIP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 ANP32CO43423 234 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 PRDM1O75626 825 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 RASGRP2Q7LDG7 609 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 FAM160B2Q86V87 743 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 DBF4BQ8NFT6 615 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 CHURC1Q8WUH1 139 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 FRAT1Q92837 279 aaPredicted RBP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 YME1L1Q96TA2 773 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 IGFLR1Q9H665 355 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 ADD3Q9UEY8 706 aaKnown RBP10.92□□□□□ -0.66
SSBP1-212ENST00000489378 CCPG1Q9ULG6 757 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 SYNPO2Q9UMS6 1093 aa10.92□□□□□ -0.66
SSBP1-212ENST00000489378 RALGAPA2Q2PPJ7 1873 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 MINDY4BA8MYZ0 360 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 SMAPO00193 183 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 NFIBO00712 420 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 GRM6O15303 877 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 IPO8O15397 1037 aaKnown RBP10.91□□□□□ -0.66
SSBP1-212ENST00000489378 ARIH2O95376 493 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 TTLL1O95922 423 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 TXNP10599 105 aaKnown RBP10.91□□□□□ -0.66
SSBP1-212ENST00000489378 MCCP23508 829 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 SIGLEC14Q08ET2 396 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 SBK1Q52WX2 424 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 KCTD1Q719H9 257 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 AFG1LQ8WV93 481 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms