RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 APOL6Q9BWW8 343 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 THAP9Q9H5L6 903 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 KRT31Q15323 416 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 NCAPG2Q86XI2 1143 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 H0YCG3 227 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 GDF11O95390 407 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 ZBED6P86452 979 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 ASPRV1Q53RT3 343 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 ZBTB1Q9Y2K1 713 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 JRKLQ9Y4A0 524 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 USP17L8P0C7I0 530 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 GARSP41250 739 aaKnown RBP19.11■□□□□ 0.65
NPHP4-209ENST00000489180 FAM47CQ5HY64 1035 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 PANX2Q96RD6 677 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 DNAJC17Q9NVM6 304 aaKnown RBP19.11■□□□□ 0.65
NPHP4-209ENST00000489180 SLAIN2Q9P270 581 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 PDE6BP35913 854 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 RAPH1Q70E73 1250 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 HDAC11Q96DB2 347 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 ADPGKQ9BRR6 497 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 Q9H521 79 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 PIH1D3Q9NQM4 214 aaKnown RBP19.11■□□□□ 0.65
NPHP4-209ENST00000489180 SYNMO15061 1565 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 ERBB4Q15303 1308 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 ANKRD65E5RJM6 399 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 FOSP01100 380 aaPredicted RBP19.11■□□□□ 0.65
NPHP4-209ENST00000489180 KRT1P04264 644 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 MCUQ8NE86 351 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 CDKL2Q92772 493 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 TTLL1O95922 423 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 PNMA6AP0CW24 399 aaPredicted RBP19.11■□□□□ 0.65
NPHP4-209ENST00000489180 GADL1Q6ZQY3 521 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 IFT122Q9HBG6 1241 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 HAUS2Q9NVX0 235 aa19.11■□□□□ 0.65
NPHP4-209ENST00000489180 SRGAP2O75044 1071 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 LUC7L3O95232 432 aaKnown RBP19.1■□□□□ 0.65
NPHP4-209ENST00000489180 ASPHQ12797 758 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 SPDL1Q96EA4 605 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 EMILIN3Q9NT22 766 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 NFU1Q9UMS0 254 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 CLRN2A0PK11 232 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 WDR91A4D1P6 747 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 IFNAR1P17181 557 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 CASP1P29466 404 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 PPP1R9AQ9ULJ8 1098 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 CCNE1P24864 410 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 MB21D1Q8N884 522 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 SMIM24O75264 130 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 SERPING1P05155 500 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 NR1D1P20393 614 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 PDZD4Q76G19 769 aaPredicted RBP19.1■□□□□ 0.65
NPHP4-209ENST00000489180 KLHL29Q96CT2 875 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 SPZ1Q9BXG8 430 aa19.1■□□□□ 0.65
NPHP4-209ENST00000489180 LRRD1A4D1F6 860 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 USP17L3A6NCW0 530 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 USP17L4A6NCW7 530 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 PRPF3O43395 683 aaKnown RBP19.09■□□□□ 0.65
NPHP4-209ENST00000489180 APBA3O96018 575 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 LMNB2Q03252 620 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 ERFEQ4G0M1 354 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 SPOUT1Q5T280 376 aaKnown RBP19.09■□□□□ 0.65
NPHP4-209ENST00000489180 USP17L1Q7RTZ2 530 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 PDZD8Q8NEN9 1154 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 ACCSQ96QU6 501 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 TRIM4Q9C037 500 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 PLEKHA8P1O95397 391 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 GAP43P17677 238 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 CASP2P42575 452 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 C4orf50Q6ZRC1 276 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 MFAP3LO75121 409 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 MSH2P43246 934 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 BPIFB4P59827 614 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 EXOC4Q96A65 974 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 JPH2Q9BR39 696 aaPredicted RBP19.09■□□□□ 0.65
NPHP4-209ENST00000489180 NDST4Q9H3R1 872 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 GOLPH3LQ9H4A5 285 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 KMT5AQ9NQR1 393 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 USP21Q9UK80 565 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 IGSF1Q8N6C5 1336 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 AATKQ6ZMQ8 1374 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 PBKQ96KB5 322 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 GDAQ9Y2T3 454 aa19.09■□□□□ 0.65
NPHP4-209ENST00000489180 KRT3P12035 628 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 IL1RL1Q01638 556 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 HACE1Q8IYU2 909 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 LRGUKQ96M69 825 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 NRBP2Q9NSY0 501 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 LOC102724428A0A0B4J2F2 783 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 SPECC1L-ADORA2AF8WAN1 911 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 OATP04181 439 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 ACTN1P12814 892 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 SIK1P57059 783 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 BASP1P80723 227 aaKnown RBP19.08■□□□□ 0.65
NPHP4-209ENST00000489180 RPAINQ86UA6 219 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 MAP7D3Q8IWC1 876 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 CSADQ9Y600 493 aa19.08■□□□□ 0.65
NPHP4-209ENST00000489180 A0A087WUV0 522 aaPredicted RBP19.08■□□□□ 0.64
NPHP4-209ENST00000489180 MX2P20592 715 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 TOB2Q14106 344 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms