RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CD4P01730 458 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 FGBP02675 491 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 ZNF286BP0CG31 522 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 CYP2C9P11712 490 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 ACTN1P12814 892 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 CPA1P15085 419 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 CSF2RAP15509 400 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 UBA1P22314 1058 aaKnown RBP10.46□□□□□ -0.73
HDAC6-232ENST00000489053 ITGB8P26012 769 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 ZNF76P36508 570 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 SP4Q02446 784 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 PTGISQ16647 500 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 UBE2SQ16763 222 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 CELF3Q5SZQ8 465 aaKnown RBP10.46□□□□□ -0.73
HDAC6-232ENST00000489053 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 TRIM22Q8IYM9 498 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 IL31RAQ8NI17 732 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 ZFP91Q96JP5 570 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-232ENST00000489053 FTOQ9C0B1 505 aaKnown RBP eCLIP10.46□□□□□ -0.73
HDAC6-232ENST00000489053 IL23AQ9NPF7 189 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 TCEAL9Q9UHQ7 104 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 ZNF215Q9UL58 517 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-232ENST00000489053 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.73
HDAC6-232ENST00000489053 LRRC37A2A6NM11 1700 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 GRIN2DO15399 1336 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 CNTNAP5Q8WYK1 1306 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 ACRP10323 421 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 PSEN2P49810 448 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 MTMR1Q13613 665 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 MFSD10Q14728 455 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 KIAA0753Q2KHM9 967 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 WWC2Q6AWC2 1192 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 CYFIP1Q7L576 1253 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 TEX2Q8IWB9 1127 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 NOC4LQ9BVI4 516 aaKnown RBP10.45□□□□□ -0.74
HDAC6-232ENST00000489053 C6orf50Q9HD87 102 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 PKD2L1Q9P0L9 805 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 SZT2Q5T011 3432 aa10.45□□□□□ -0.74
HDAC6-232ENST00000489053 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-232ENST00000489053 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-232ENST00000489053 SMCO2A6NFE2 343 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 SPATA31C2B4DYI2 1134 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 MEIS2O14770 477 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 PFKMP08237 780 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 GNAT1P11488 350 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 RFC2P35250 354 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 SMAD3P84022 425 aaKnown RBP10.44□□□□□ -0.74
HDAC6-232ENST00000489053 UTP14CQ5TAP6 766 aaKnown RBP10.44□□□□□ -0.74
HDAC6-232ENST00000489053 MCTP2Q6DN12 878 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 METTL7BQ6UX53 244 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 RUFY3Q7L099 469 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 DEFB128Q7Z7B8 93 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 CCDC148Q8NFR7 591 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 CAGE1Q8TC20 777 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 PPP1R13LQ8WUF5 828 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 GPRASP2Q96D09 838 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 INPP4AQ96PE3 977 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-232ENST00000489053 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDAC6-232ENST00000489053 USP26Q9BXU7 913 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 RIC8AQ9NPQ8 531 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 BARHL2Q9NY43 387 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 MSRAQ9UJ68 235 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 PCDHA6Q9UN73 950 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 PCDHA8Q9Y5H6 950 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 SLC4A7Q9Y6M7 1214 aa10.44□□□□□ -0.74
HDAC6-232ENST00000489053 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 C17orf102A2RUQ5 167 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 PITPNM1O00562 1244 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 F2P00734 622 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 SCG2P13521 617 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 GNA11P29992 359 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 ICAM3P32942 547 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 ADD1P35611 737 aaKnown RBP10.43□□□□□ -0.74
HDAC6-232ENST00000489053 EPHB4P54760 987 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 MRPS9P82933 396 aaKnown RBP10.43□□□□□ -0.74
HDAC6-232ENST00000489053 AP3B2Q13367 1082 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 COL9A3Q14050 684 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-232ENST00000489053 ZNF365Q70YC5 407 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 Q7L0L9 218 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 OTOP2Q7RTS6 562 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 REXO1Q8N1G1 1221 aaKnown RBP10.43□□□□□ -0.74
HDAC6-232ENST00000489053 GLG1Q92896 1179 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 KCNB2Q92953 911 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 SCLYQ96I15 445 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 SDF4Q9BRK5 362 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 SLC26A6Q9BXS9 759 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 AZI2Q9H6S1 392 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 PDRG1Q9NUG6 133 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 HDAC6Q9UBN7 1215 aa10.43□□□□□ -0.74
HDAC6-232ENST00000489053 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 UMODL1Q5DID0 1318 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 H3BRB1 525 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 STXBP3O00186 592 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 MAFGO15525 162 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 CDKL5O76039 1030 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 RGS20O76081 388 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 PARNO95453 639 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms