RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 KCNJ6P48051 423 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 TRAF7Q6Q0C0 670 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 CHST3Q7LGC8 479 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 ADGRF4Q8IZF3 695 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 NSUN6Q8TEA1 469 aaKnown RBP13.28□□□□□ -0.28
SNU13-208ENST00000488571 HLA-CQ95604 372 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 RNF41Q9H4P4 317 aaPredicted RBP13.28□□□□□ -0.28
SNU13-208ENST00000488571 EPHX3Q9H6B9 360 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 GTF2IRD1Q9UHL9 959 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 DDX41Q9UJV9 622 aaKnown RBP13.28□□□□□ -0.28
SNU13-208ENST00000488571 ABCB11O95342 1321 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 SIP14410 1827 aa13.27□□□□□ -0.28
SNU13-208ENST00000488571 MYH7BA7E2Y1 1941 aa13.27□□□□□ -0.28
SNU13-208ENST00000488571 KDM4AO75164 1064 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 CKBP12277 381 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 CASTP20810 708 aaKnown RBP13.27□□□□□ -0.29
SNU13-208ENST00000488571 RRP1P56182 461 aaKnown RBP13.27□□□□□ -0.29
SNU13-208ENST00000488571 HDAC1Q13547 482 aaPredicted RBP13.27□□□□□ -0.29
SNU13-208ENST00000488571 STXBP2Q15833 593 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 TRIM71Q2Q1W2 868 aaKnown RBP13.27□□□□□ -0.29
SNU13-208ENST00000488571 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 CNKSR3Q6P9H4 555 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 GDPD5Q8WTR4 605 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 ANKS1AQ92625 1134 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 WNT8BQ93098 351 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 EMID1Q96A84 441 aaPredicted RBP13.27□□□□□ -0.29
SNU13-208ENST00000488571 IWS1Q96ST2 819 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 CRBNQ96SW2 442 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 RMDN3Q96TC7 470 aa13.27□□□□□ -0.29
SNU13-208ENST00000488571 TRIM6-TRIM34B2RNG4 842 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 HAS3O00219 553 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 OPLAHO14841 1288 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 RGS20O76081 388 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 GJB5O95377 273 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 PARNO95453 639 aaKnown RBP13.26□□□□□ -0.29
SNU13-208ENST00000488571 F2P00734 622 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 HOXD8P13378 290 aaPredicted RBP13.26□□□□□ -0.29
SNU13-208ENST00000488571 EIF2AK2P19525 551 aaKnown RBP13.26□□□□□ -0.29
SNU13-208ENST00000488571 SDSP20132 328 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 PSEN2P49810 448 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 HIC1Q14526 733 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 MBTPS1Q14703 1052 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 DGKDQ16760 1214 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 MCF2L2Q86YR7 1114 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
SNU13-208ENST00000488571 KHSRPQ92945 711 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNU13-208ENST00000488571 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
SNU13-208ENST00000488571 KAT14Q9H8E8 782 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
SNU13-208ENST00000488571 BRWD1Q9NSI6 2320 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 LINC01553A4QN01 128 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 B4E1Z4 1266 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 ZNF213O14771 459 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 NR3C2P08235 984 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 ZNF286BP0CG31 522 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 HSD17B4P51659 736 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 ZNF200P98182 395 aaPredicted RBP13.25□□□□□ -0.29
SNU13-208ENST00000488571 ASPRV1Q53RT3 343 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 ZNF618Q5T7W0 954 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 IQCA1Q86XH1 822 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 FBXO11Q86XK2 927 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 C7orf31Q8N865 590 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 PPTC7Q8NI37 304 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 LRFN3Q9BTN0 628 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 LNPKQ9C0E8 428 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 PXMP2Q9NR77 195 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 LMCD1Q9NZU5 365 aa13.25□□□□□ -0.29
SNU13-208ENST00000488571 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
SNU13-208ENST00000488571 ABHD14A-ACY1A0A1B0GW23 586 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 EIF3JO75822 258 aaKnown RBP13.24□□□□□ -0.29
SNU13-208ENST00000488571 NT5C2P49902 561 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
SNU13-208ENST00000488571 ERVK-21P61565 698 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 GHRHRQ02643 423 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 PTK7Q13308 1070 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 LAMC2Q13753 1193 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 MFSD10Q14728 455 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 KIAA0753Q2KHM9 967 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 CCDC178Q5BJE1 867 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 STAG2Q8N3U4 1231 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 FAM122AQ96E09 287 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 RAD9AQ99638 391 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 KATNAL1Q9BW62 490 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 CD320Q9NPF0 282 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 C11orf16Q9NQ32 467 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 ZSWIM5Q9P217 1185 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 MTUS1Q9ULD2 1270 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms