RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TGFB3P10600 412 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 NAPAP54920 295 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 CCL23P55773 120 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 NID2Q14112 1375 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 MYSM1Q5VVJ2 828 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 TANC1Q9C0D5 1861 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 FAM217BQ9NTX9 383 aaPredicted RBP20.4■□□□□ 0.86
ITGB1-215ENST00000488494 RTEL1Q9NZ71 1219 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 FIBPO43427 364 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 HOXD8P13378 290 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-215ENST00000488494 PSMA5P28066 241 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 PTPN11Q06124 597 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-215ENST00000488494 SEMA3FQ13275 785 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 HSDL1Q3SXM5 330 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 TYW1BQ6NUM6 668 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 PPP1R18Q6NYC8 613 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 XRRA1Q6P2D8 792 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 PSRC1Q6PGN9 363 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-215ENST00000488494 C16orf59Q7L2K0 433 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 NOD1Q9Y239 953 aa20.39■□□□□ 0.85
ITGB1-215ENST00000488494 V9GY48 417 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-215ENST00000488494 SPDYE3A6NKU9 549 aa20.38■□□□□ 0.85
ITGB1-215ENST00000488494 EPB41L2O43491 1005 aaKnown RBP20.38■□□□□ 0.85
ITGB1-215ENST00000488494 MFSD10Q14728 455 aa20.38■□□□□ 0.85
ITGB1-215ENST00000488494 TMEM240Q5SV17 173 aa20.38■□□□□ 0.85
ITGB1-215ENST00000488494 KATNAL1Q9BW62 490 aa20.38■□□□□ 0.85
ITGB1-215ENST00000488494 MLXIPQ9HAP2 919 aa20.38■□□□□ 0.85
ITGB1-215ENST00000488494 IL23AQ9NPF7 189 aa20.38■□□□□ 0.85
ITGB1-215ENST00000488494 SPATA31C2B4DYI2 1134 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 STXBP3O00186 592 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 ICAM3P32942 547 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 PSEN2P49810 448 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 ADCY7P51828 1080 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 SMAD3P84022 425 aaKnown RBP20.37■□□□□ 0.85
ITGB1-215ENST00000488494 GDF6Q6KF10 455 aaPredicted RBP20.37■□□□□ 0.85
ITGB1-215ENST00000488494 ZNF365Q70YC5 407 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 SESTD1Q86VW0 696 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 SCLYQ96I15 445 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 ALG1Q9BT22 464 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 AGXT2Q9BYV1 514 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 BCAS3Q9H6U6 928 aa20.37■□□□□ 0.85
ITGB1-215ENST00000488494 MYH7BA7E2Y1 1941 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 CCDC196A0A1B0GTZ2 297 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 NOP56O00567 594 aaKnown RBP20.36■□□□□ 0.85
ITGB1-215ENST00000488494 ADD1P35611 737 aaKnown RBP20.36■□□□□ 0.85
ITGB1-215ENST00000488494 PTGISQ16647 500 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 KIAA0753Q2KHM9 967 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 METTL7BQ6UX53 244 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 FBXL16Q8N461 479 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
ITGB1-215ENST00000488494 C7orf31Q8N865 590 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 USP26Q9BXU7 913 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 RIC8AQ9NPQ8 531 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 BARHL2Q9NY43 387 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 PCDHA6Q9UN73 950 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 PCDHA8Q9Y5H6 950 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 COL6A3P12111 3177 aa20.36■□□□□ 0.85
ITGB1-215ENST00000488494 DOCK5Q9H7D0 1870 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 NEDD9Q14511 834 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 ZNF697Q5TEC3 545 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 RUFY3Q7L099 469 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 CYFIP1Q7L576 1253 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 NLRX1Q86UT6 975 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 FAM161BQ96MY7 647 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 CTAGE1Q96RT6 745 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 EHMT1Q9H9B1 1298 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 HDAC6Q9UBN7 1215 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 GTF2IRD1Q9UHL9 959 aa20.35■□□□□ 0.85
ITGB1-215ENST00000488494 HAS3O00219 553 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 PITPNM1O00562 1244 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 PPFIA4O75335 1185 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 LGALS2P05162 132 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 ITGB5P18084 799 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 SP4Q02446 784 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 PFKFB3Q16875 520 aaPredicted RBP20.34■□□□□ 0.85
ITGB1-215ENST00000488494 RASIP1Q5U651 963 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 FAM109BQ6ICB4 259 aaPredicted RBP20.34■□□□□ 0.85
ITGB1-215ENST00000488494 GPRASP2Q96D09 838 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 PGBD1Q96JS3 809 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 UPF3BQ9BZI7 483 aaKnown RBP20.34■□□□□ 0.85
ITGB1-215ENST00000488494 ZSWIM6Q9HCJ5 1215 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 MTMR10Q9NXD2 777 aa20.34■□□□□ 0.85
ITGB1-215ENST00000488494 SCG2P13521 617 aa20.33■□□□□ 0.85
ITGB1-215ENST00000488494 BFSP2Q13515 415 aa20.33■□□□□ 0.85
ITGB1-215ENST00000488494 TOB2Q14106 344 aaPredicted RBP20.33■□□□□ 0.85
ITGB1-215ENST00000488494 CCDC155Q8N6L0 562 aa20.33■□□□□ 0.85
ITGB1-215ENST00000488494 DHX38Q92620 1227 aaKnown RBP20.33■□□□□ 0.85
ITGB1-215ENST00000488494 GPR20Q99678 358 aa20.33■□□□□ 0.85
ITGB1-215ENST00000488494 C16orf70Q9BSU1 422 aa20.33■□□□□ 0.85
ITGB1-215ENST00000488494 NCOA5Q9HCD5 579 aaKnown RBP20.33■□□□□ 0.85
ITGB1-215ENST00000488494 TELO2Q9Y4R8 837 aa20.33■□□□□ 0.85
ITGB1-215ENST00000488494 CYP46A1Q9Y6A2 500 aa20.33■□□□□ 0.85
ITGB1-215ENST00000488494 CHD9Q3L8U1 2897 aa20.32■□□□□ 0.84
ITGB1-215ENST00000488494 SMCO2A6NFE2 343 aa20.32■□□□□ 0.84
ITGB1-215ENST00000488494 PPFIA3O75145 1194 aa20.32■□□□□ 0.84
ITGB1-215ENST00000488494 FGBP02675 491 aa20.32■□□□□ 0.84
ITGB1-215ENST00000488494 MTMR1Q13613 665 aa20.32■□□□□ 0.84
ITGB1-215ENST00000488494 OTOP2Q7RTS6 562 aa20.32■□□□□ 0.84
ITGB1-215ENST00000488494 DEFB128Q7Z7B8 93 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms