RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 NAA16Q6N069 864 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-213ENST00000488386 SHISA2Q6UWI4 295 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 OTOP1Q7RTM1 612 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 CCNJLQ8IV13 435 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 MIGA1Q8NAN2 632 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 GLIS3Q8NEA6 775 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 ASAP3Q8TDY4 903 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 TGFBRAP1Q8WUH2 860 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 EDC3Q96F86 508 aaKnown RBP7.2□□□□□ -1.26
CDHR3-213ENST00000488386 MUC3BQ9H195 1237 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 LIN7BQ9HAP6 207 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 GPR108Q9NPR9 543 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 ZBTB40Q9NUA8 1239 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 RNF19AQ9NV58 838 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 SAP30BPQ9UHR5 308 aaKnown RBP7.2□□□□□ -1.26
CDHR3-213ENST00000488386 CPA4Q9UI42 421 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 ZNF112Q9UJU3 913 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 FOCADQ5VW36 1801 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 PTPRFP10586 1907 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 UNCXA6NJT0 531 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 TRIM75PA6NK02 468 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 PDHXO00330 501 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 CYP2C8P10632 490 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 CETPP11597 493 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 CYP7A1P22680 504 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 CTGFP29279 349 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 CHRNA4P43681 627 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 GSTO1P78417 241 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 JAG1P78504 1218 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 SP3Q02447 781 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 PPATQ06203 517 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 SNAPC2Q13487 334 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 SETDB1Q15047 1291 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 SPRED3Q2MJR0 410 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 NOL9Q5SY16 702 aaKnown RBP7.19□□□□□ -1.26
CDHR3-213ENST00000488386 OTUD7BQ6GQQ9 843 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 FBXO46Q6PJ61 603 aaPredicted RBP7.19□□□□□ -1.26
CDHR3-213ENST00000488386 GADL1Q6ZQY3 521 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 VN1R5Q7Z5H4 357 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 SCYL3Q8IZE3 742 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 MAGEB6Q8N7X4 407 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 DNAJC2Q99543 621 aaKnown RBP7.19□□□□□ -1.26
CDHR3-213ENST00000488386 OSBPL5Q9H0X9 879 aaPredicted RBP7.19□□□□□ -1.26
CDHR3-213ENST00000488386 EHD4Q9H223 541 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.19□□□□□ -1.262e-7■■■□□ 15.1
CDHR3-213ENST00000488386 ABCB6Q9NP58 842 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 DDX19BQ9UMR2 479 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 PPME1Q9Y570 386 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 ZHX2Q9Y6X8 837 aa7.19□□□□□ -1.26
CDHR3-213ENST00000488386 SPDYE3A6NKU9 549 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 PEX10O60683 326 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 GADD45BO75293 160 aaPredicted RBP7.18□□□□□ -1.26
CDHR3-213ENST00000488386 LDHCP07864 332 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 SELPP16109 830 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 RAC1P63000 192 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDHR3-213ENST00000488386 PRRT3Q5FWE3 981 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 TSHZ3Q63HK5 1081 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 GPAT2Q6NUI2 795 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 TMEM151AQ8N4L1 468 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 GALNT11Q8NCW6 608 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 HOOK2Q96ED9 719 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 ERO1AQ96HE7 468 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 DNAJC18Q9H819 358 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 PICK1Q9NRD5 415 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 PALD1Q9ULE6 856 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 PTPN22Q9Y2R2 807 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 PTCH2Q9Y6C5 1203 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 MYH1P12882 1939 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 FLT1P17948 1338 aa7.18□□□□□ -1.26
CDHR3-213ENST00000488386 CENPFP49454 3210 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 GOLIM4O00461 696 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 TLR2O60603 784 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 TAGLNQ01995 201 aaKnown RBP7.17□□□□□ -1.26
CDHR3-213ENST00000488386 PLA2G4EQ3MJ16 856 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 TREML2Q5T2D2 321 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 TMCO4Q5TGY1 634 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 FBXO11Q86XK2 927 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 RPAP2Q8IXW5 612 aaPredicted RBP7.17□□□□□ -1.26
CDHR3-213ENST00000488386 DTWD1Q8N5C7 304 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 SH3TC2Q8TF17 1288 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 BSNDQ8WZ55 320 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 NOL10Q9BSC4 688 aaKnown RBP7.17□□□□□ -1.26
CDHR3-213ENST00000488386 BOLA2Q9H3K6 86 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 AFG3L2Q9Y4W6 797 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 NAV1Q8NEY1 1877 aa7.17□□□□□ -1.26
CDHR3-213ENST00000488386 HTTP42858 3142 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 MGAMO43451 1857 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 A0A096LPE4 126 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 A0A0G2JLL6 359 aaPredicted RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 A0A1W2PPZ6 126 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 H3BRJ5 948 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 SMIM22K7EJ46 135 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 DLL1O00548 723 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 CTNND1O60716 968 aaKnown RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 BAG3O95817 575 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 IFIT2P09913 472 aaKnown RBP7.16□□□□□ -1.26
CDHR3-213ENST00000488386 ELNP15502 786 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 RGS19P49795 217 aa7.16□□□□□ -1.26
CDHR3-213ENST00000488386 LACTBP83111 547 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms