RNA–Protein interactions for RNA: ENST00000488376.2

SYNE1-226, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 414 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-226ENST00000488376 SPATA31C2B4DYI2 1134 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 SCG2P13521 617 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 RAG1P15918 1043 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 ITGB5P18084 799 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 ADCY7P51828 1080 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 C8orf34Q49A92 452 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 DHX37Q8IY37 1157 aaKnown RBP15.97■□□□□ 0.15
SYNE1-226ENST00000488376 TDHQ8IZJ6 230 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 EMID1Q96A84 441 aaPredicted RBP15.97■□□□□ 0.15
SYNE1-226ENST00000488376 LRCH3Q96II8 777 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 SLC26A6Q9BXS9 759 aa15.97■□□□□ 0.15
SYNE1-226ENST00000488376 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
SYNE1-226ENST00000488376 MROH7Q68CQ1 1323 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 CCDC196A0A1B0GTZ2 297 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 PRPF3O43395 683 aaKnown RBP15.96■□□□□ 0.15
SYNE1-226ENST00000488376 CYP2C18P33260 490 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 SHHQ15465 462 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 FAM47CQ5HY64 1035 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 PPP1R18Q6NYC8 613 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 PPTC7Q8NI37 304 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 SPATA33Q96N06 139 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 TPCN1Q9ULQ1 816 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 LAMA3Q16787 3333 aa15.96■□□□□ 0.15
SYNE1-226ENST00000488376 A0A1W2PPC1 479 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 SPDYE3A6NKU9 549 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 ATP9AO75110 1047 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 TIMP1P01033 207 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 CYP2C9P11712 490 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 HOXD8P13378 290 aaPredicted RBP15.95■□□□□ 0.14
SYNE1-226ENST00000488376 IFNAR1P17181 557 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 ICAM3P32942 547 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 CLK2P49760 499 aaKnown RBP15.95■□□□□ 0.14
SYNE1-226ENST00000488376 LAMC2Q13753 1193 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 BRDTQ58F21 947 aaPredicted RBP15.95■□□□□ 0.14
SYNE1-226ENST00000488376 CYFIP1Q7L576 1253 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 CYP2W1Q8TAV3 490 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 IL17RAQ96F46 866 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 ZNF274Q96GC6 653 aaPredicted RBP15.95■□□□□ 0.14
SYNE1-226ENST00000488376 AIFM3Q96NN9 605 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 CTAGE1Q96RT6 745 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 PKD2L1Q9P0L9 805 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 UBIAD1Q9Y5Z9 338 aa15.95■□□□□ 0.14
SYNE1-226ENST00000488376 hCG_1984214I3L0E3 225 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 TLR3O15455 904 aaKnown RBP15.94■□□□□ 0.14
SYNE1-226ENST00000488376 FIBPO43427 364 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 KPNA6O60684 536 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 STAM2O75886 525 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 LARGE1O95461 756 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 TGFB3P10600 412 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 AK2P54819 239 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 ANAPC15P60006 121 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 HIC1Q14526 733 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 DGKDQ16760 1214 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 GNPTABQ3T906 1256 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 JAKMIP3Q5VZ66 844 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 KCNV1Q6PIU1 500 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 C16orf59Q7L2K0 433 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 ZNF713Q8N859 430 aaPredicted RBP15.94■□□□□ 0.14
SYNE1-226ENST00000488376 RASGRP4Q8TDF6 673 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 NOC4LQ9BVI4 516 aaKnown RBP15.94■□□□□ 0.14
SYNE1-226ENST00000488376 ANO3Q9BYT9 981 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 WNT8AQ9H1J5 351 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 VPS54Q9P1Q0 977 aa15.94■□□□□ 0.14
SYNE1-226ENST00000488376 SCN10AQ9Y5Y9 1956 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 SLC34A2O95436 690 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 CSF2RAP15509 400 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 KCNA2P16389 499 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 SP4Q02446 784 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 FPGSQ05932 587 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 SCRN1Q12765 414 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 GDF6Q6KF10 455 aaPredicted RBP15.93■□□□□ 0.14
SYNE1-226ENST00000488376 XRRA1Q6P2D8 792 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 TRIM50Q86XT4 487 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 C16orf70Q9BSU1 422 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 ALG1Q9BT22 464 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 RNF26Q9BY78 433 aaPredicted RBP15.93■□□□□ 0.14
SYNE1-226ENST00000488376 ZMYND12Q9H0C1 365 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 HIPK3Q9H422 1215 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 MLXIPQ9HAP2 919 aa15.93■□□□□ 0.14
SYNE1-226ENST00000488376 HAS3O00219 553 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 F2P00734 622 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 ACRP10323 421 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 PSEN2P49810 448 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 CCL23P55773 120 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 MFSD10Q14728 455 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 MFSD5Q6N075 450 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 NFRKBQ6P4R8 1299 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 GPRASP2Q96D09 838 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 VWCEQ96DN2 955 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 UIMC1Q96RL1 719 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 GPR20Q99678 358 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 JADE2Q9NQC1 790 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 HDAC6Q9UBN7 1215 aa15.92■□□□□ 0.14
SYNE1-226ENST00000488376 SZT2Q5T011 3432 aa15.91■□□□□ 0.14
SYNE1-226ENST00000488376 ESYT2A0FGR8 921 aa15.91■□□□□ 0.14
SYNE1-226ENST00000488376 CTDNEP1O95476 244 aa15.91■□□□□ 0.14
SYNE1-226ENST00000488376 LGALS2P05162 132 aa15.91■□□□□ 0.14
SYNE1-226ENST00000488376 ARP10275 920 aa15.91■□□□□ 0.14
SYNE1-226ENST00000488376 SREBF1P36956 1147 aa15.91■□□□□ 0.14
SYNE1-226ENST00000488376 ZNF200P98182 395 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms