RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 SCN10AQ9Y5Y9 1956 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 E7EWF7 191 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 OPLAHO14841 1288 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 SGSM2O43147 1006 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 CA3P07451 260 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 ADGRE1Q14246 886 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 KIAA0753Q2KHM9 967 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 AAK1Q2M2I8 961 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 CELF3Q5SZQ8 465 aaKnown RBP13□□□□□ -0.33
VAMP7-206ENST00000488344 CNKSR3Q6P9H4 555 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 CASC1Q6TDU7 716 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 CUL5Q93034 780 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 PIGSQ96S52 555 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 MAP3K14Q99558 947 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 ALG1Q9BT22 464 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 IL25Q9H293 177 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 MLXIPQ9HAP2 919 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 HDAC6Q9UBN7 1215 aa13□□□□□ -0.33
VAMP7-206ENST00000488344 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
VAMP7-206ENST00000488344 EMSYQ7Z589 1322 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 HAS3O00219 553 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 TLL1O43897 1013 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 PPP1R11O60927 126 aaPredicted RBP12.99□□□□□ -0.33
VAMP7-206ENST00000488344 DDAH1O94760 285 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 GGPS1O95749 300 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 CKBP12277 381 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 HOXA13P31271 388 aaPredicted RBP12.99□□□□□ -0.33
VAMP7-206ENST00000488344 GNAQP50148 359 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 PTH1RQ03431 593 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 TROAPQ12815 778 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
VAMP7-206ENST00000488344 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
VAMP7-206ENST00000488344 ASB2Q96Q27 587 aa12.99□□□□□ -0.33
VAMP7-206ENST00000488344 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
VAMP7-206ENST00000488344 TNFRSF10AO00220 468 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 NOP56O00567 594 aaKnown RBP12.98□□□□□ -0.33
VAMP7-206ENST00000488344 CXCL10P02778 98 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 ZNF286BP0CG31 522 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 MYOGP15173 224 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 POU3F3P20264 500 aaPredicted RBP12.98□□□□□ -0.33
VAMP7-206ENST00000488344 UBA1P22314 1058 aaKnown RBP12.98□□□□□ -0.33
VAMP7-206ENST00000488344 SMARCA1P28370 1054 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 IKBKEQ14164 716 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 NEDD9Q14511 834 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 CCDC85BQ15834 202 aaPredicted RBP12.98□□□□□ -0.33
VAMP7-206ENST00000488344 XRRA1Q6P2D8 792 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 FCHSD1Q86WN1 690 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 MICALL1Q8N3F8 863 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 PPP1R13LQ8WUF5 828 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
VAMP7-206ENST00000488344 FRMPD4Q14CM0 1322 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 C17orf102A2RUQ5 167 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 FIBPO43427 364 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 CAND2O75155 1236 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 RGS20O76081 388 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 GNAT1P11488 350 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
VAMP7-206ENST00000488344 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
VAMP7-206ENST00000488344 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 DHX38Q92620 1227 aaKnown RBP12.97□□□□□ -0.33
VAMP7-206ENST00000488344 TMEM87BQ96K49 555 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
VAMP7-206ENST00000488344 CTAGE1Q96RT6 745 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 USP26Q9BXU7 913 aa12.97□□□□□ -0.33
VAMP7-206ENST00000488344 ZNF215Q9UL58 517 aaPredicted RBP12.97□□□□□ -0.33
VAMP7-206ENST00000488344 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
VAMP7-206ENST00000488344 CCDC69A6NI79 296 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 H3BRB1 525 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 CYTH3O43739 400 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 CALM1P0DP23 149 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 CALM2P0DP24 149 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 CALM3P0DP25 149 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 ICAM3P32942 547 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 MCM5P33992 734 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 TAP1Q03518 808 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 HSDL1Q3SXM5 330 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 METTL7BQ6UX53 244 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 MB21D2Q8IYB1 491 aaPredicted RBP12.96□□□□□ -0.33
VAMP7-206ENST00000488344 ZNF654Q8IZM8 581 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.33
VAMP7-206ENST00000488344 IL31RAQ8NI17 732 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 IGDCC4Q8TDY8 1250 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 ARNTL2Q8WYA1 636 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 TUT1Q9H6E5 874 aaKnown RBP12.96□□□□□ -0.33
VAMP7-206ENST00000488344 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 COG5Q9UP83 839 aa12.96□□□□□ -0.33
VAMP7-206ENST00000488344 CDH23Q9H251 3354 aa12.96□□□□□ -0.34
VAMP7-206ENST00000488344 PIK3CDO00329 1044 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 NBNO60934 754 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 SLC35G1Q2M3R5 365 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 ZNF618Q5T7W0 954 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms