RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ZFP91Q96JP5 570 aaPredicted RBP17.74■□□□□ 0.43
TRIM50-203ENST00000488217 CERS4Q9HA82 394 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 THEGQ9P2T0 379 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 CHD7Q9P2D1 2997 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 LCTP09848 1927 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 SORBS3O60504 671 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 GGPS1O95749 300 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 CXCL10P02778 98 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 KCNJ6P48051 423 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 TAP1Q03518 808 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 RBL2Q08999 1139 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 IL31RAQ8NI17 732 aa17.73■□□□□ 0.43
TRIM50-203ENST00000488217 LRRC37A2A6NM11 1700 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 ABHD14A-ACY1A0A1B0GW23 586 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 TNFRSF10AO00220 468 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 TLL1O43897 1013 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 NBNO60934 754 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 ZNF286BP0CG31 522 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 ZNF200P98182 395 aaPredicted RBP17.72■□□□□ 0.43
TRIM50-203ENST00000488217 PIBF1Q8WXW3 757 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 MAP3K14Q99558 947 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 C16orf70Q9BSU1 422 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 ZBED2Q9BTP6 218 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 MTCH2Q9Y6C9 303 aa17.72■□□□□ 0.43
TRIM50-203ENST00000488217 SPATA31C2B4DYI2 1134 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 GTPBP6O43824 516 aaPredicted RBP17.71■□□□□ 0.43
TRIM50-203ENST00000488217 SMARCA1P28370 1054 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 ANTXR2P58335 489 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 WDR5P61964 334 aaKnown RBP17.71■□□□□ 0.43
TRIM50-203ENST00000488217 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.43
TRIM50-203ENST00000488217 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
TRIM50-203ENST00000488217 IKBKEQ14164 716 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 TRIM71Q2Q1W2 868 aaKnown RBP17.71■□□□□ 0.43
TRIM50-203ENST00000488217 ZNF618Q5T7W0 954 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 CNKSR3Q6P9H4 555 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 GPKOWQ92917 476 aaPredicted RBP eCLIP17.71■□□□□ 0.43
TRIM50-203ENST00000488217 BCAS3Q9H6U6 928 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 RTEL1Q9NZ71 1219 aa17.71■□□□□ 0.43
TRIM50-203ENST00000488217 H3BRB1 525 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 STAM2O75886 525 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 UBA1P22314 1058 aaKnown RBP17.7■□□□□ 0.42
TRIM50-203ENST00000488217 ICAM3P32942 547 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 KIF5BP33176 963 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 HIC1Q14526 733 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 TRAF7Q6Q0C0 670 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 MB21D2Q8IYB1 491 aaPredicted RBP17.7■□□□□ 0.42
TRIM50-203ENST00000488217 RAD9AQ99638 391 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 TUT1Q9H6E5 874 aaKnown RBP17.7■□□□□ 0.42
TRIM50-203ENST00000488217 RBM8AQ9Y5S9 174 aaKnown RBP17.7■□□□□ 0.42
TRIM50-203ENST00000488217 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
TRIM50-203ENST00000488217 EPOPA6NHQ4 379 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 EFCAB14O75071 495 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 ARHGEF15O94989 841 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 NEDD9Q14511 834 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 TMCO2Q7Z6W1 182 aaPredicted RBP17.69■□□□□ 0.42
TRIM50-203ENST00000488217 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
TRIM50-203ENST00000488217 WNT8BQ93098 351 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 RRP36Q96EU6 259 aaKnown RBP17.69■□□□□ 0.42
TRIM50-203ENST00000488217 MTA3Q9BTC8 594 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 USP26Q9BXU7 913 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 LY9Q9HBG7 655 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 XIRP2A4UGR9 3374 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 MUC3AQ02505 3323 aa17.69■□□□□ 0.42
TRIM50-203ENST00000488217 C17orf102A2RUQ5 167 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 RSPH10B2B2RC85 870 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 NOP56O00567 594 aaKnown RBP17.68■□□□□ 0.42
TRIM50-203ENST00000488217 RSPH10BP0C881 870 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 BMP1P13497 986 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 THPOP40225 353 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 GNAQP50148 359 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 SKIV2LQ15477 1246 aaKnown RBP17.68■□□□□ 0.42
TRIM50-203ENST00000488217 TCTN1Q2MV58 587 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 CASC1Q6TDU7 716 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 CYFIP1Q7L576 1253 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 SERINC5Q86VE9 423 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 IL27Q8NEV9 243 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 ADAMTS19Q8TE59 1207 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 CUL5Q93034 780 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 ATP6V0A1Q93050 837 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 INPP4AQ96PE3 977 aaPredicted RBP17.68■□□□□ 0.42
TRIM50-203ENST00000488217 SPZ1Q9BXG8 430 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 RNPEPQ9H4A4 650 aa17.68■□□□□ 0.42
TRIM50-203ENST00000488217 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 PIK3CDO00329 1044 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 PRC1O43663 620 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 LGR5O75473 907 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 DDAH1O94760 285 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 GJB5O95377 273 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 MCM5P33992 734 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 DEFB103AP81534 67 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 MBTPS1Q14703 1052 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 AAK1Q2M2I8 961 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 XRRA1Q6P2D8 792 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 USP17L6PQ6QN14 398 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms