RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PMEPA1Q969W9 287 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 NACC1Q96RE7 527 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 USP28Q96RU2 1077 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 PLVAPQ9BX97 442 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 SLC40A1Q9NP59 571 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RTEL1Q9NZ71 1219 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 PUF60Q9UHX1 559 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RBM8AQ9Y5S9 174 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RPS6KL1Q9Y6S9 549 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 USP31Q70CQ4 1352 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 SALL1Q9NSC2 1324 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 EME2A4GXA9 379 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 H3BQV1 296 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 HIP1O00291 1037 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 PES1O00541 588 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 MAP3K6O95382 1288 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 YEATS4O95619 227 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 SLC3A2P08195 630 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 USP17L7P0C7H9 530 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RHOXF2BP0C7M4 288 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 ERCC5P28715 1186 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 GCKP35557 465 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RAB27AP51159 221 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 NAP1L1P55209 391 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 GNGT1P63211 74 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 NCAPD2Q15021 1401 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 CFAP100Q494V2 611 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 SPECC1LQ69YQ0 1117 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 C6orf89Q6UWU4 347 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RASGRP2Q7LDG7 609 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 CCDC13Q8IYE1 715 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 FAM177A1Q8N128 213 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 NOA1Q8NC60 698 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 C3orf20Q8ND61 904 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 C3orf58Q8NDZ4 430 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 CCDC148Q8NFR7 591 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RPGRIP1Q96KN7 1286 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 HHIPQ96QV1 700 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 TCF12Q99081 682 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 NAPGQ99747 312 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 PAIP2Q9BPZ3 127 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 RHOXF2Q9BQY4 288 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 SDF4Q9BRK5 362 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 CRACR2AQ9BSW2 395 aa5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 TMX4Q9H1E5 349 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-213ENST00000488131 MAP3K15Q6ZN16 1313 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 SPATA31D1Q6ZQQ2 1576 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 FAM237AA0A1B0GTK4 181 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 GOLGA6L7A0A1B0GV03 622 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 NDUFAB1O14561 156 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 GIPC1O14908 333 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 JAK2O60674 1132 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF202O95125 648 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 SERPINC1P01008 464 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 FESP07332 822 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF18P17022 549 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 ATP5JP18859 108 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF76P36508 570 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 CDR1P51861 262 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 NDUFA8P51970 172 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 MTA1Q13330 715 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 KARSQ15046 597 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 NKAPLQ5M9Q1 402 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 CYB5D1Q6P9G0 228 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 DHX32Q7L7V1 743 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 FAM228AQ86W67 206 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 KCNG4Q8TDN1 519 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 AENQ8WTP8 325 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 RNF34Q969K3 372 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 NSUN5Q96P11 429 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 PNMA5Q96PV4 448 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZKSCAN3Q9BRR0 538 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 C19orf44Q9H6X5 657 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZSWIM4Q9H7M6 989 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 EBF2Q9HAK2 575 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 METTL5Q9NRN9 209 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 CPSF2Q9P2I0 782 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 FAM8A1Q9UBU6 413 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 KLF15Q9UIH9 416 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 MYO6Q9UM54 1294 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 PCDHA7Q9UN72 937 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 TTF2Q9UNY4 1162 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 MON2Q7Z3U7 1717 aa5.31□□□□□ -1.56
CDC42BPA-213ENST00000488131 GOLGA6BA6NDN3 693 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 J3QW42 95 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 NFKBIEO00221 500 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 BIN1O00499 593 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 AHCYL1O43865 530 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 OPA1O60313 960 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 DTNBO60941 627 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 HOXD8P13378 290 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 SOX18P35713 384 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 ME1P48163 572 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 MTX1Q13505 466 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 KRT32Q14532 448 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 PDIA5Q14554 519 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 TBC1D25Q3MII6 688 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms