RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FBXW5Q969U6 566 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 MFSD3Q96ES6 412 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 CDIP1Q9H305 208 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 EPB41L4BQ9H329 900 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 TNPO3Q9Y5L0 923 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 CADPSQ9ULU8 1353 aa5.55□□□□□ -1.52
ECHDC1-217ENST00000488087 CCDC66A2RUB6 948 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 B4E1Z4 1266 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 MAFKO60675 156 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 PYGMP11217 842 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 COL6A2P12110 1019 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 FLT3P36888 993 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 SLC6A11P48066 632 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 MAPKAPK2P49137 400 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 PLEKHN1Q494U1 663 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 TMEM132EQ6IEE7 984 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 EP400NLQ6ZTU2 488 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 OTOP3Q7RTS5 596 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 TMC6Q7Z403 805 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 PIP4K2CQ8TBX8 421 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 SEC14L1Q92503 715 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 INTS7Q9NVH2 962 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 KLHL14Q9P2G3 628 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 COQ6Q9Y2Z9 468 aa5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-217ENST00000488087 HGSO14964 777 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 SGSM2O43147 1006 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 ZBTB7AO95365 584 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 JMJD7P0C870 316 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 MYCLP1P12525 358 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 NEK4P51957 841 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 PRR5P85299 388 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 ZNF460Q14592 562 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 CRY1Q16526 586 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 MILR1Q7Z6M3 343 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 DDX53Q86TM3 631 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 LRRTM3Q86VH5 581 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 IGSF22Q8N9C0 903 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 PANK1Q8TE04 598 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 ZNF552Q9H707 407 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 SLC6A20Q9NP91 592 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 SIRT5Q9NXA8 310 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 PALD1Q9ULE6 856 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 PCDHB4Q9Y5E5 795 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 HCFC2Q9Y5Z7 792 aa5.53□□□□□ -1.52
ECHDC1-217ENST00000488087 WNT9AO14904 365 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 KRT15P19012 456 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 VIPR1P32241 457 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 YBX1P67809 324 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 SRSF3P84103 164 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 ZNF200P98182 395 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 SLC9A5Q14940 896 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 CFAP100Q494V2 611 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 TM4SF20Q53R12 229 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 PIK3R6Q5UE93 754 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 ZCCHC8Q6NZY4 707 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 UBE2R2Q712K3 238 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 C16orf59Q7L2K0 433 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 FAM177A1Q8N128 213 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 CISD2Q8N5K1 135 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 ALG3Q92685 438 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 YIPF4Q9BSR8 244 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 KCNK12Q9HB15 430 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 CBLCQ9ULV8 474 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 NUB1Q9Y5A7 615 aa5.52□□□□□ -1.53
ECHDC1-217ENST00000488087 M0R2C6 588 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 HRKO00198 91 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 SLC27A2O14975 620 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 NKRFO15226 690 aaKnown RBP eCLIP5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 KPNA6O60684 536 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 NPTXRO95502 500 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 PDE6AP16499 860 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 GPR19Q15760 415 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 EMC4Q5J8M3 183 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 RNF187Q5TA31 235 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 ABHD17CQ6PCB6 329 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 OSTM1Q86WC4 334 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 FBXO15Q8NCQ5 510 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 TSPAN17Q96FV3 270 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 WNK4Q96J92 1243 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 CELF4Q9BZC1 486 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 SMOC1Q9H4F8 434 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 BCAS3Q9H6U6 928 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 MYOTQ9UBF9 498 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 DSEQ9UL01 958 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 ZNF652Q9Y2D9 606 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 SBNO2Q9Y2G9 1366 aa5.51□□□□□ -1.53
ECHDC1-217ENST00000488087 PDE8AO60658 829 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 PEX10O60683 326 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 CKMP06732 381 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 TMEM177Q53S58 311 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 PTRH1Q86Y79 214 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 RBM12BQ8IXT5 1001 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 AHI1Q8N157 1196 aa5.5□□□□□ -1.53
ECHDC1-217ENST00000488087 PPM1KQ8N3J5 372 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms