RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GPR108Q9NPR9 543 aa8.08□□□□□ -1.12
HDAC3-209ENST00000486618 TMEM39AQ9NV64 488 aa8.08□□□□□ -1.12
HDAC3-209ENST00000486618 NRBP1Q9UHY1 535 aa8.08□□□□□ -1.12
HDAC3-209ENST00000486618 PHF24Q9UPV7 400 aa8.08□□□□□ -1.12
HDAC3-209ENST00000486618 NOP58Q9Y2X3 529 aaKnown RBP8.08□□□□□ -1.12
HDAC3-209ENST00000486618 ZNF236Q9UL36 1845 aa8.08□□□□□ -1.12
HDAC3-209ENST00000486618 LAMA2P24043 3122 aaKnown RBP8.07□□□□□ -1.12
HDAC3-209ENST00000486618 TLDC2A0PJX2 215 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 A6NJY4 79 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 DCDC2CA8MYV0 355 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 COBLO75128 1261 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 CYP2E1P05181 493 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-209ENST00000486618 HSP90AA1P07900 732 aaKnown RBP8.07□□□□□ -1.12
HDAC3-209ENST00000486618 FCER1AP12319 257 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 COPB2P35606 906 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 DYNLL1P63167 89 aaKnown RBP8.07□□□□□ -1.12
HDAC3-209ENST00000486618 PLS1Q14651 629 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 CCDC96Q2M329 555 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 FAM47AQ5JRC9 791 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 PRAMEF19Q5SWL8 479 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 AKNAD1Q5T1N1 836 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 ADGRA1Q86SQ6 560 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 NCAPG2Q86XI2 1143 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 AMOTL1Q8IY63 956 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 TIFAQ96CG3 184 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 FAM122AQ96E09 287 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 GPATCH3Q96I76 525 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 ZNF512BQ96KM6 892 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-209ENST00000486618 TOX2Q96NM4 488 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 NIFKQ9BYG3 293 aaKnown RBP8.07□□□□□ -1.12
HDAC3-209ENST00000486618 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 CRISPLD1Q9H336 500 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 XPNPEP3Q9NQH7 507 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 THEGQ9P2T0 379 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
HDAC3-209ENST00000486618 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-209ENST00000486618 MYO5AQ9Y4I1 1855 aaKnown RBP8.06□□□□□ -1.12
HDAC3-209ENST00000486618 PRUNE2Q8WUY3 3088 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 PQBP1O60828 265 aaKnown RBP8.06□□□□□ -1.12
HDAC3-209ENST00000486618 GNAI2P04899 355 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 ATP4AP20648 1035 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 ITGB8P26012 769 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 PLA2G5P39877 138 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 EPHB4P54760 987 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 MRPS5P82675 430 aaKnown RBP8.06□□□□□ -1.12
HDAC3-209ENST00000486618 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 CCDC129Q6ZRS4 1044 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 USP38Q8NB14 1042 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 SLC44A5Q8NCS7 719 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 NUP133Q8WUM0 1156 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 PPM1EQ8WY54 764 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 ARHGAP45Q92619 1136 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 MAML3Q96JK9 1138 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 CALR3Q96L12 384 aaKnown RBP8.06□□□□□ -1.12
HDAC3-209ENST00000486618 ASB2Q96Q27 587 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 TSPAN18Q96SJ8 248 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 VRTNQ9H8Y1 702 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
HDAC3-209ENST00000486618 VCANP13611 3396 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 A0A1W2PQ45 241 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 A0A1W2PQY0 241 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 RNF225M0QZC1 329 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 IPO8O15397 1037 aaKnown RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 EPB41L2O43491 1005 aaKnown RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 IDH1O75874 414 aaKnown RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 SLC25A27O95847 323 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 TIMP1P01033 207 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 POLR3DP05423 398 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 AKR1A1P14550 325 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 ZAP70P43403 619 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 MAP3K12Q12852 859 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 PPIGQ13427 754 aaKnown RBP eCLIP8.05□□□□□ -1.129e-6■■□□□ 12.8
HDAC3-209ENST00000486618 HDAC1Q13547 482 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 KCTD2Q14681 263 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 SEPT2Q15019 361 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 C4orf46Q504U0 113 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 EFHC2Q5JST6 749 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 ZNF280DQ6N043 979 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 ANKRD33Q7Z3H0 272 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 MIGA1Q8NAN2 632 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 KCNB2Q92953 911 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 ACDQ96AP0 544 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 DBNDD2Q9BQY9 259 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 TINF2Q9BSI4 451 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 SH2D4AQ9H788 454 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 PIH1D3Q9NQM4 214 aaKnown RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 STARD7Q9NQZ5 370 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 ZNF358Q9NW07 568 aa8.05□□□□□ -1.12
HDAC3-209ENST00000486618 FEZ2Q9UHY8 353 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 DIS3Q9Y2L1 958 aaKnown RBP8.05□□□□□ -1.12
HDAC3-209ENST00000486618 MROH7Q68CQ1 1323 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 PLXNA1Q9UIW2 1896 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 PNMA6EA0A0J9YXQ4 647 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 FLOT1O75955 427 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 PGK1P00558 417 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 GUCY1A2P33402 732 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 SHMT1P34896 483 aa8.04□□□□□ -1.12
HDAC3-209ENST00000486618 FAAP100Q0VG06 881 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms