RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 NLRP5P59047 1200 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 RABEP1Q15276 862 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 C1orf53Q5VUE5 145 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 XRRA1Q6P2D8 792 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 KCNV1Q6PIU1 500 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 DHX37Q8IY37 1157 aaKnown RBP16.88■□□□□ 0.29
USP4-212ENST00000486549 RASGRP4Q8TDF6 673 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 AFG1LQ8WV93 481 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 INPP4AQ96PE3 977 aaPredicted RBP16.88■□□□□ 0.29
USP4-212ENST00000486549 SH3GLB2Q9NR46 395 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 STK36Q9NRP7 1315 aa16.88■□□□□ 0.29
USP4-212ENST00000486549 A0A0U1RQG5 324 aaPredicted RBP16.87■□□□□ 0.29
USP4-212ENST00000486549 FIBPO43427 364 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 PQBP1O60828 265 aaKnown RBP16.87■□□□□ 0.29
USP4-212ENST00000486549 PSMC6P62333 389 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 SP2Q02086 613 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 SNX17Q15036 470 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 NLRX1Q86UT6 975 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 TEX2Q8IWB9 1127 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 BICD2Q8TD16 824 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 TBC1D32Q96NH3 1257 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 BACH2Q9BYV9 841 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 ORC3Q9UBD5 711 aaPredicted RBP16.87■□□□□ 0.29
USP4-212ENST00000486549 ELP1O95163 1332 aa16.87■□□□□ 0.29
USP4-212ENST00000486549 A6NJR5 290 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 SPATA31C2B4DYI2 1134 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 CABYRO75952 493 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 MMP3P08254 477 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 TGFB3P10600 412 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 ICAM3P32942 547 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 MAGEA10P43363 369 aaPredicted RBP16.86■□□□□ 0.29
USP4-212ENST00000486549 CHMP4BP1P59074 171 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 PURAQ00577 322 aaKnown RBP16.86■□□□□ 0.29
USP4-212ENST00000486549 ST3GAL1Q11201 340 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 SEMA3FQ13275 785 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 CELF3Q5SZQ8 465 aaKnown RBP16.86■□□□□ 0.29
USP4-212ENST00000486549 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 UBE2OQ9C0C9 1292 aaKnown RBP16.86■□□□□ 0.29
USP4-212ENST00000486549 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
USP4-212ENST00000486549 PRDM5Q9NQX1 630 aaPredicted RBP16.86■□□□□ 0.29
USP4-212ENST00000486549 ST18O60284 1047 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 JAK2O60674 1132 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 ITGB5P18084 799 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 ZNF76P36508 570 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 SREBF1P36956 1147 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 FOSBP53539 338 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 ARHGAP4P98171 946 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 TLE2Q04725 743 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 MTMR1Q13613 665 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 MYSM1Q5VVJ2 828 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 NSUN7Q8NE18 718 aaKnown RBP16.85■□□□□ 0.29
USP4-212ENST00000486549 GPRASP2Q96D09 838 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 SPATA33Q96N06 139 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 MTG1Q9BT17 334 aaPredicted RBP16.85■□□□□ 0.29
USP4-212ENST00000486549 ALG1Q9BT22 464 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 PCDHA4Q9UN74 947 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 KCNJ14Q9UNX9 436 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 UBIAD1Q9Y5Z9 338 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 TRIOBPQ9H2D6 2365 aa16.85■□□□□ 0.29
USP4-212ENST00000486549 ARVCFO00192 962 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 SP4Q02446 784 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 ITGA7Q13683 1181 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 NEDD9Q14511 834 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 MCTP2Q6DN12 878 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 CYFIP1Q7L576 1253 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 TDHQ8IZJ6 230 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 PPP1R13LQ8WUF5 828 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 WASF1Q92558 559 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 EMID1Q96A84 441 aaPredicted RBP16.84■□□□□ 0.29
USP4-212ENST00000486549 ZSCAN31Q96LW9 406 aaPredicted RBP16.84■□□□□ 0.29
USP4-212ENST00000486549 MXRA8Q9BRK3 442 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 GJB4Q9NTQ9 266 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 SCN10AQ9Y5Y9 1956 aa16.84■□□□□ 0.29
USP4-212ENST00000486549 NOP56O00567 594 aaKnown RBP16.83■□□□□ 0.28
USP4-212ENST00000486549 GRIN2DO15399 1336 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 KPNA6O60684 536 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 FDPSP14324 419 aaKnown RBP16.83■□□□□ 0.28
USP4-212ENST00000486549 XBP1P17861 261 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 DGKDQ16760 1214 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 GPR153Q6NV75 609 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 BLIDQ8IZY5 108 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 PPTC7Q8NI37 304 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 CYP2W1Q8TAV3 490 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 CDHR1Q96JP9 859 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 JADE2Q9NQC1 790 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 PDLIM7Q9NR12 457 aa16.83■□□□□ 0.28
USP4-212ENST00000486549 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
USP4-212ENST00000486549 DCDC2CA8MYV0 355 aa16.82■□□□□ 0.28
USP4-212ENST00000486549 ATP9AO75110 1047 aa16.82■□□□□ 0.28
USP4-212ENST00000486549 CLTBP09497 229 aa16.82■□□□□ 0.28
USP4-212ENST00000486549 ZNF286BP0CG31 522 aa16.82■□□□□ 0.28
USP4-212ENST00000486549 LRIT3Q3SXY7 679 aa16.82■□□□□ 0.28
USP4-212ENST00000486549 CEP55Q53EZ4 464 aa16.82■□□□□ 0.28
USP4-212ENST00000486549 FAM47CQ5HY64 1035 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms