RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 RREB1Q92766 1687 aa7.27□□□□□ -1.25
USP41-204ENST00000486536 CACNA1FO60840 1977 aa7.27□□□□□ -1.25
USP41-204ENST00000486536 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
USP41-204ENST00000486536 N4BP2Q86UW6 1770 aaPredicted RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 IRS4O14654 1257 aaPredicted RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 TMPRSS2O15393 492 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 UBOX5O94941 541 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 S100BP04271 92 aaPredicted RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 NAT2P11245 290 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 SRSF11Q05519 484 aaKnown RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 HSP90AA2PQ14568 343 aaPredicted RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 TXNRD1Q16881 649 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 FOXD4L6Q3SYB3 417 aaPredicted RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 FOXD4L3Q6VB84 417 aaPredicted RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 CDC37L1Q7L3B6 337 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 UBE3BQ7Z3V4 1068 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 FERMT3Q86UX7 667 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 PPFIBP1Q86W92 1011 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 THNSL2Q86YJ6 484 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 JAMLQ86YT9 394 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 PRPF38AQ8NAV1 312 aaKnown RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 RNF214Q8ND24 703 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 CHAC2Q8WUX2 184 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 EXOC2Q96KP1 924 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 BICC1Q9H694 974 aaKnown RBP7.26□□□□□ -1.25
USP41-204ENST00000486536 FBRSQ9HAH7 460 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 SPON1Q9HCB6 807 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 HOMER2Q9NSB8 354 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 LRRC4BQ9NT99 713 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 CRIM1Q9NZV1 1036 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 LRP2BPQ9P2M1 347 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 NARFQ9UHQ1 456 aa7.26□□□□□ -1.25
USP41-204ENST00000486536 A0A087X0B3 334 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 TRAV20A0A0B4J274 112 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 PLD2O14939 933 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 DEAF1O75398 565 aaPredicted RBP7.25□□□□□ -1.25
USP41-204ENST00000486536 SURF6O75683 361 aaKnown RBP7.25□□□□□ -1.25
USP41-204ENST00000486536 RGS3P49796 1198 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 FOXO4P98177 505 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 TRAPPC3LQ5T215 181 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 CCDC181Q5TID7 509 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 HEATR6Q6AI08 1181 aaKnown RBP7.25□□□□□ -1.25
USP41-204ENST00000486536 ERC1Q8IUD2 1116 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 SCUBE1Q8IWY4 988 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 BAHD1Q8TBE0 780 aaPredicted RBP7.25□□□□□ -1.25
USP41-204ENST00000486536 KIF1BPQ96EK5 621 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 IER2Q9BTL4 223 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 LRRCC1Q9C099 1032 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 CAAP1Q9H8G2 361 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 NCOA5Q9HCD5 579 aaKnown RBP7.25□□□□□ -1.25
USP41-204ENST00000486536 ARHGEF4Q9NR80 690 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 ATP8A1Q9Y2Q0 1164 aa7.25□□□□□ -1.25
USP41-204ENST00000486536 MRPS23Q9Y3D9 190 aaKnown RBP7.25□□□□□ -1.25
USP41-204ENST00000486536 TRBV23-1A0A0A0MS06 115 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 C9IYK1 514 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 H3BM21 787 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 EPHX1P07099 455 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 CSF1RP07333 972 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 POU3F3P20264 500 aaPredicted RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 GPTP24298 496 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 NTF4P34130 210 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 STAT3P40763 770 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 NKG7Q16617 165 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 DUOXA2Q1HG44 320 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 FNDC3BQ53EP0 1204 aaKnown RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 EPHA10Q5JZY3 1008 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 YOD1Q5VVQ6 348 aaPredicted RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 TDRD10Q5VZ19 366 aaKnown RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 LMBR1LQ6UX01 489 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 NPAS3Q8IXF0 933 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 LRRN4CLQ8ND94 238 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 FLAD1Q8NFF5 587 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 UBASH3BQ8TF42 649 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 PPP1R14AQ96A00 147 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 FANCD2OSQ96PS1 177 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 DPH2Q9BQC3 489 aaPredicted RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 UTP14AQ9BVJ6 771 aaKnown RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 RUSC1Q9BVN2 902 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 TMPRSS13Q9BYE2 586 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 FAM126AQ9BYI3 521 aaPredicted RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 IRX2Q9BZI1 471 aaPredicted RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 TRMT112Q9UI30 125 aaKnown RBP7.24□□□□□ -1.25
USP41-204ENST00000486536 NIP7Q9Y221 180 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP41-204ENST00000486536 EXOC6BQ9Y2D4 811 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 UBN2Q6ZU65 1347 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 SH3TC1Q8TE82 1336 aa7.24□□□□□ -1.25
USP41-204ENST00000486536 BTAF1O14981 1849 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 PDE8AO60658 829 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 CLEC3AO75596 197 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 NTSR2O95665 410 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 ITGAVP06756 1048 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 NID1P14543 1247 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 RFC4P35249 363 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 RFX5P48382 616 aaPredicted RBP7.23□□□□□ -1.25
USP41-204ENST00000486536 CDKN1CP49918 316 aaPredicted RBP7.23□□□□□ -1.25
USP41-204ENST00000486536 NFKB2Q00653 900 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 G3BP1Q13283 466 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP41-204ENST00000486536 COL9A3Q14050 684 aaPredicted RBP7.23□□□□□ -1.25
USP41-204ENST00000486536 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms