RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ADCY7P51828 1080 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 UBE2SQ16763 222 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 PCNX4Q63HM2 1172 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 WWC2Q6AWC2 1192 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 XRRA1Q6P2D8 792 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 PSRC1Q6PGN9 363 aaPredicted RBP14.8□□□□□ -0.04
CHMP3-208ENST00000486404 ZNF713Q8N859 430 aaPredicted RBP14.8□□□□□ -0.04
CHMP3-208ENST00000486404 MLXIPQ9HAP2 919 aa14.8□□□□□ -0.04
CHMP3-208ENST00000486404 MEIS2O14770 477 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 FIBPO43427 364 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 RGS20O76081 388 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 TGFB3P10600 412 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 CSF2RAP15509 400 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 AKAP17AQ02040 695 aaKnown RBP14.79□□□□□ -0.04
CHMP3-208ENST00000486404 PTPN11Q06124 597 aaPredicted RBP14.79□□□□□ -0.04
CHMP3-208ENST00000486404 NID2Q14112 1375 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 CELF3Q5SZQ8 465 aaKnown RBP14.79□□□□□ -0.04
CHMP3-208ENST00000486404 GPR153Q6NV75 609 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 NLRX1Q86UT6 975 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 CCDC155Q8N6L0 562 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 PPP1R13LQ8WUF5 828 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 INPP4AQ96PE3 977 aaPredicted RBP14.79□□□□□ -0.04
CHMP3-208ENST00000486404 NOC4LQ9BVI4 516 aaKnown RBP14.79□□□□□ -0.04
CHMP3-208ENST00000486404 RTEL1Q9NZ71 1219 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 CYP46A1Q9Y6A2 500 aa14.79□□□□□ -0.04
CHMP3-208ENST00000486404 TRIP12Q14669 1992 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-208ENST00000486404 GBF1Q92538 1859 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 CDC27P30260 824 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 EPHB4P54760 987 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 MRPS9P82933 396 aaKnown RBP14.78□□□□□ -0.04
CHMP3-208ENST00000486404 NEDD9Q14511 834 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 MFSD10Q14728 455 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 C7orf31Q8N865 590 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 CDHR1Q96JP9 859 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 ALG1Q9BT22 464 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 GLT8D2Q9H1C3 349 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 MTIF3Q9H2K0 278 aaKnown RBP14.78□□□□□ -0.04
CHMP3-208ENST00000486404 V9GY48 417 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-208ENST00000486404 KAT6AQ92794 2004 aa14.78□□□□□ -0.04
CHMP3-208ENST00000486404 UMODL1Q5DID0 1318 aa14.77□□□□□ -0.04
CHMP3-208ENST00000486404 STXBP3O00186 592 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 F2P00734 622 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 CYP2C9P11712 490 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 PSEN2P49810 448 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 CCL23P55773 120 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 PTGISQ16647 500 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 MYSM1Q5VVJ2 828 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 RUFY3Q7L099 469 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 DEFB123Q8N688 67 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 CCDC12Q8WUD4 166 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-208ENST00000486404 BARHL2Q9NY43 387 aa14.77□□□□□ -0.05
CHMP3-208ENST00000486404 SPATA31C2B4DYI2 1134 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
CHMP3-208ENST00000486404 ACRP10323 421 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 SCG2P13521 617 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 ICAM3P32942 547 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 SP2Q02086 613 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 SP4Q02446 784 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 FUT2Q10981 343 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 BFSP2Q13515 415 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 KIAA0753Q2KHM9 967 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 HSDL1Q3SXM5 330 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 ZNF697Q5TEC3 545 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 METTL7BQ6UX53 244 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 CYFIP1Q7L576 1253 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 TEX2Q8IWB9 1127 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 RETREG2Q8NC44 543 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 GIMAP8Q8ND71 665 aaPredicted RBP14.76□□□□□ -0.05
CHMP3-208ENST00000486404 KAT2BQ92831 832 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 GPRASP2Q96D09 838 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.76□□□□□ -0.05
CHMP3-208ENST00000486404 USP26Q9BXU7 913 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 UPF3BQ9BZI7 483 aaKnown RBP14.76□□□□□ -0.05
CHMP3-208ENST00000486404 WNT8AQ9H1J5 351 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 IL23AQ9NPF7 189 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 RIC8AQ9NPQ8 531 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 PCDHA6Q9UN73 950 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 PCDHA8Q9Y5H6 950 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 SZT2Q5T011 3432 aa14.76□□□□□ -0.05
CHMP3-208ENST00000486404 SMCO2A6NFE2 343 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 PPFIA4O75335 1185 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 ADD1P35611 737 aaKnown RBP14.75□□□□□ -0.05
CHMP3-208ENST00000486404 AP3B2Q13367 1082 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 MTMR1Q13613 665 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 PFKFB3Q16875 520 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-208ENST00000486404 Q7L0L9 218 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 SESTD1Q86VW0 696 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 FBXL16Q8N461 479 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 SCLYQ96I15 445 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 ANO3Q9BYT9 981 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 AGXT2Q9BYV1 514 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 ZSWIM6Q9HCJ5 1215 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 FAM217BQ9NTX9 383 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-208ENST00000486404 PKD2L1Q9P0L9 805 aa14.75□□□□□ -0.05
CHMP3-208ENST00000486404 ZNF215Q9UL58 517 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-208ENST00000486404 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 CPLX1O14810 134 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 FOSP01100 380 aaPredicted RBP14.74□□□□□ -0.05
CHMP3-208ENST00000486404 LGALS2P05162 132 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 HOXD8P13378 290 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms