RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ADAM15Q13444 863 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 CAMK1Q14012 370 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 BRDTQ58F21 947 aaPredicted RBP11.59□□□□□ -0.55
SND1-213ENST00000486037 HSP90AB4PQ58FF6 505 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 ADGRD2Q7Z7M1 963 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 ADSSL1Q8N142 457 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 RHPN1Q8TCX5 695 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 TOP1MTQ969P6 601 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 ALG1Q9BT22 464 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 ARPP21Q9UBL0 812 aaPredicted RBP11.59□□□□□ -0.55
SND1-213ENST00000486037 CCPG1Q9ULG6 757 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 PRR12Q9ULL5 1215 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 ZNF292O60281 2723 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 RAD50Q92878 1312 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 TPRP12270 2363 aaKnown RBP11.59□□□□□ -0.55
SND1-213ENST00000486037 GSG1L2A8MUP6 293 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 NKRFO15226 690 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■■□□ 15.3
SND1-213ENST00000486037 NCK2O43639 380 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 TTLL1O95922 423 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 TXNP10599 105 aaKnown RBP11.58□□□□□ -0.56
SND1-213ENST00000486037 EDNRBP24530 442 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 PTK7Q13308 1070 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 SBK1Q52WX2 424 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 PLEKHG4Q58EX7 1191 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 FAM160B2Q86V87 743 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 TMEM105Q8N8V8 129 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 SMRP1Q8NCR6 262 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 RMDN1Q96DB5 314 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 KIF1BPQ96EK5 621 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 CNTNAP3BQ96NU0 1288 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 CNTNAP3Q9BZ76 1288 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 BCL11AQ9H165 835 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 IRF2BPLQ9H1B7 796 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 EPB41L4AQ9HCS5 686 aaPredicted RBP11.58□□□□□ -0.56
SND1-213ENST00000486037 PAG1Q9NWQ8 432 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
SND1-213ENST00000486037 PTPDC1A2A3K4 754 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 C5orf67F2Z3F1 127 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 GLP2RO95838 553 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 DNAJB1P25685 340 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 CALML3P27482 149 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 SLC1A4P43007 532 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 NDUFV1P49821 464 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 PDE4BQ07343 736 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 LY6KQ17RY6 165 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 CCDC62Q6P9F0 684 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 PLEKHM2Q8IWE5 1019 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 SCFD2Q8WU76 684 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 CHURC1Q8WUH1 139 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 CLEC4DQ8WXI8 215 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 GMCL1Q96IK5 515 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 RPGRIP1Q96KN7 1286 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 BOLA2Q9H3K6 86 aa11.57□□□□□ -0.56
SND1-213ENST00000486037 ADD3Q9UEY8 706 aaKnown RBP11.57□□□□□ -0.56
SND1-213ENST00000486037 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
SND1-213ENST00000486037 BARX2Q9UMQ3 279 aaPredicted RBP11.57□□□□□ -0.56
SND1-213ENST00000486037 USP15Q9Y4E8 981 aaPredicted RBP11.57□□□□□ -0.56
SND1-213ENST00000486037 MYH7P12883 1935 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 PLIN4Q96Q06 1357 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 EP300Q09472 2414 aaPredicted RBP11.56□□□□□ -0.56
SND1-213ENST00000486037 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 ICAM1P05362 532 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 ZNF286BP0CG31 522 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 BMPR1AP36894 532 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 PSEN2P49810 448 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 RBM10P98175 930 aaKnown RBP11.56□□□□□ -0.56
SND1-213ENST00000486037 PDE4DQ08499 809 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 UBE3CQ15386 1083 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 TTBK2Q6IQ55 1244 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 CHST3Q7LGC8 479 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 RIPOR3Q96MK2 946 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
SND1-213ENST00000486037 SYNPO2Q9UMS6 1093 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 PCDHGC5Q9Y5F6 944 aa11.56□□□□□ -0.56
SND1-213ENST00000486037 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 HAS3O00219 553 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 PLA2G6O60733 806 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 ICAM3P32942 547 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 SLC16A2P36021 539 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 COASYQ13057 564 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 MFSD10Q14728 455 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 PTPN21Q16825 1174 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
SND1-213ENST00000486037 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 NEDD1Q8NHV4 660 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 NKD2Q969F2 451 aaPredicted RBP11.55□□□□□ -0.56
SND1-213ENST00000486037 PHF7Q9BWX1 381 aaPredicted RBP11.55□□□□□ -0.56
SND1-213ENST00000486037 IFIH1Q9BYX4 1025 aaKnown RBP11.55□□□□□ -0.56
SND1-213ENST00000486037 LMAN2LQ9H0V9 348 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 RANBP17Q9H2T7 1088 aaKnown RBP11.55□□□□□ -0.56
SND1-213ENST00000486037 SMOC2Q9H3U7 446 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 RC3H2Q9HBD1 1191 aaKnown RBP11.55□□□□□ -0.56
SND1-213ENST00000486037 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
SND1-213ENST00000486037 LOC102724159A0A0B4J2E5 919 aa11.54□□□□□ -0.56
SND1-213ENST00000486037 MMP1P03956 469 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms