RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 AP3B2Q13367 1082 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 LAMC2Q13753 1193 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 SNX17Q15036 470 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 CXCL17Q6UXB2 119 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 NLRX1Q86UT6 975 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 DHX37Q8IY37 1157 aaKnown RBP14.25□□□□□ -0.13
HMG20B-211ENST00000486028 INPP4AQ96PE3 977 aaPredicted RBP14.25□□□□□ -0.13
HMG20B-211ENST00000486028 POLR3EQ9NVU0 708 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 LIMCH1Q9UPQ0 1083 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 ATP11BQ9Y2G3 1177 aa14.25□□□□□ -0.13
HMG20B-211ENST00000486028 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
HMG20B-211ENST00000486028 SPATA31C2B4DYI2 1134 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 FIBPO43427 364 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 MYL3P08590 195 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 ICAM3P32942 547 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 NLRP5P59047 1200 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 ARHGAP1Q07960 439 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 ME3Q16798 604 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 TRIM60Q495X7 471 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 FAM177A1Q8N128 213 aaPredicted RBP14.24□□□□□ -0.13
HMG20B-211ENST00000486028 NECAB1Q8N987 351 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 IL27Q8NEV9 243 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 AFG1LQ8WV93 481 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 EMID1Q96A84 441 aaPredicted RBP14.24□□□□□ -0.13
HMG20B-211ENST00000486028 CDHR1Q96JP9 859 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 KIF2CQ99661 725 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 VPS54Q9P1Q0 977 aa14.24□□□□□ -0.13
HMG20B-211ENST00000486028 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
HMG20B-211ENST00000486028 TLE2Q04725 743 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 RABEP1Q15276 862 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 CELF3Q5SZQ8 465 aaKnown RBP14.23□□□□□ -0.13
HMG20B-211ENST00000486028 JAKMIP3Q5VZ66 844 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 REXO1Q8N1G1 1221 aaKnown RBP14.23□□□□□ -0.13
HMG20B-211ENST00000486028 PPTC7Q8NI37 304 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 WASF1Q92558 559 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 GTF3C6Q969F1 213 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 MTG1Q9BT17 334 aaPredicted RBP14.23□□□□□ -0.13
HMG20B-211ENST00000486028 SEZ6LQ9BYH1 1024 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 ANO3Q9BYT9 981 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 MLXIPQ9HAP2 919 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 TMEM260Q9NX78 707 aa14.23□□□□□ -0.13
HMG20B-211ENST00000486028 STK36Q9NRP7 1315 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 DCDC2CA8MYV0 355 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 ARVCFO00192 962 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 PQBP1O60828 265 aaKnown RBP14.22□□□□□ -0.13
HMG20B-211ENST00000486028 GGPS1O95749 300 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 XBP1P17861 261 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 UBA1P22314 1058 aaKnown RBP14.22□□□□□ -0.13
HMG20B-211ENST00000486028 SREBF1P36956 1147 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 CDK7P50613 346 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 PURAQ00577 322 aaKnown RBP14.22□□□□□ -0.13
HMG20B-211ENST00000486028 SP2Q02086 613 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 ITGA7Q13683 1181 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 NEDD9Q14511 834 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 DGKDQ16760 1214 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 GALNT17Q6IS24 598 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 ANKRD33Q7Z3H0 272 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 GIMAP8Q8ND71 665 aaPredicted RBP14.22□□□□□ -0.13
HMG20B-211ENST00000486028 GPRASP2Q96D09 838 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 ZSCAN31Q96LW9 406 aaPredicted RBP14.22□□□□□ -0.13
HMG20B-211ENST00000486028 SPATA33Q96N06 139 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 TOX2Q96NM4 488 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 JADE2Q9NQC1 790 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 ORC3Q9UBD5 711 aaPredicted RBP14.22□□□□□ -0.13
HMG20B-211ENST00000486028 PRKAG2Q9UGJ0 569 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 ZMYND8Q9ULU4 1186 aaPredicted RBP14.22□□□□□ -0.13
HMG20B-211ENST00000486028 UBIAD1Q9Y5Z9 338 aa14.22□□□□□ -0.13
HMG20B-211ENST00000486028 MROH7Q68CQ1 1323 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 MAFGO15525 162 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 LARGE1O95461 756 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 CTDNEP1O95476 244 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 MMP3P08254 477 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 ITGB5P18084 799 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 ZNF76P36508 570 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 SEMA3FQ13275 785 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 MTMR1Q13613 665 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 PGBD1Q96JS3 809 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 TBC1D32Q96NH3 1257 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 SENP7Q9BQF6 1050 aa14.21□□□□□ -0.13
HMG20B-211ENST00000486028 KIAA1217Q5T5P2 1943 aa14.21□□□□□ -0.14
HMG20B-211ENST00000486028 TLR3O15455 904 aaKnown RBP14.2□□□□□ -0.14
HMG20B-211ENST00000486028 ST18O60284 1047 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 SORBS3O60504 671 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 PPFIA4O75335 1185 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 SYN1P17600 705 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 PSMC6P62333 389 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 ARHGAP4P98171 946 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 CEP55Q53EZ4 464 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 METTL7BQ6UX53 244 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 SLC43A3Q8NBI5 491 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 AIFM3Q96NN9 605 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 MXRA8Q9BRK3 442 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 BACH2Q9BYV9 841 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 PRDM5Q9NQX1 630 aaPredicted RBP14.2□□□□□ -0.14
HMG20B-211ENST00000486028 SH2B1Q9NRF2 756 aaPredicted RBP14.2□□□□□ -0.14
HMG20B-211ENST00000486028 PCDHA4Q9UN74 947 aa14.2□□□□□ -0.14
HMG20B-211ENST00000486028 GRIN2DO15399 1336 aa14.19□□□□□ -0.14
HMG20B-211ENST00000486028 MEIS1O00470 390 aa14.19□□□□□ -0.14
HMG20B-211ENST00000486028 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms