RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 RGL3Q3MIN7 710 aa6.65□□□□□ -1.34
GCFC2-209ENST00000486016 EMC4Q5J8M3 183 aa6.65□□□□□ -1.34
GCFC2-209ENST00000486016 TMEM145Q8NBT3 493 aa6.65□□□□□ -1.34
GCFC2-209ENST00000486016 TMEM169Q96HH4 297 aa6.65□□□□□ -1.34
GCFC2-209ENST00000486016 SSBP05455 408 aaKnown RBP eCLIP6.64□□□□□ -1.35
GCFC2-209ENST00000486016 ERCC5P28715 1186 aaPredicted RBP6.64□□□□□ -1.35
GCFC2-209ENST00000486016 GRIA2P42262 883 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 ADAM17P78536 824 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 LSAMPQ13449 338 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 FXNQ16595 210 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 TBC1D10BQ4KMP7 808 aaPredicted RBP6.64□□□□□ -1.35
GCFC2-209ENST00000486016 ZC3H18Q86VM9 953 aaKnown RBP6.64□□□□□ -1.35
GCFC2-209ENST00000486016 VPS37DQ86XT2 251 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 HOMEZQ8IX15 550 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 PPIL6Q8IXY8 311 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 WASF3Q9UPY6 502 aa6.64□□□□□ -1.35
GCFC2-209ENST00000486016 TCRBV5S2A0A599 114 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 MATN3O15232 486 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 DDAH1O94760 285 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 GJB6O95452 261 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 PLATP00750 562 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 ZNF28P17035 718 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 SLC10A6Q3KNW5 377 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 TXNDC5Q8NBS9 432 aaKnown RBP6.63□□□□□ -1.35
GCFC2-209ENST00000486016 ARRDC4Q8NCT1 418 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 TINF2Q9BSI4 451 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 NGRNQ9NPE2 291 aaKnown RBP6.63□□□□□ -1.35
GCFC2-209ENST00000486016 LRP2BPQ9P2M1 347 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 PCDHA2Q9Y5H9 948 aa6.63□□□□□ -1.35
GCFC2-209ENST00000486016 MROH6A6NGR9 719 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 DDX3XO00571 662 aaKnown RBP eCLIP6.62□□□□□ -1.35
GCFC2-209ENST00000486016 HGSO14964 777 aaPredicted RBP6.62□□□□□ -1.35
GCFC2-209ENST00000486016 MYO1BO43795 1136 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 LRG1P02750 347 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 KIAA2012Q0VF49 1180 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 MCTP2Q6DN12 878 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 MCF2L2Q86YR7 1114 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.62□□□□□ -1.35
GCFC2-209ENST00000486016 EPN3Q9H201 632 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 HSPBP1Q9NZL4 362 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 INVSQ9Y283 1065 aa6.62□□□□□ -1.35
GCFC2-209ENST00000486016 A0A1W2PQU0 124 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 NKX3-2P78367 333 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 MAP4K2Q12851 820 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 STEAP3Q658P3 488 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 TEPPQ6URK8 271 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 C1QTNF3Q9BXJ4 246 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 DTLQ9NZJ0 730 aa6.61□□□□□ -1.35
GCFC2-209ENST00000486016 COA3Q9Y2R0 106 aaPredicted RBP6.61□□□□□ -1.35
GCFC2-209ENST00000486016 KCNJ6P48051 423 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 PPP2R2AP63151 447 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 EEPD1Q7L9B9 569 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 LGI4Q8N135 537 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 TOE1Q96GM8 510 aaKnown RBP6.6□□□□□ -1.35
GCFC2-209ENST00000486016 YTHDC1Q96MU7 727 aaKnown RBP6.6□□□□□ -1.35
GCFC2-209ENST00000486016 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 SORCS2Q96PQ0 1159 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.6□□□□□ -1.35
GCFC2-209ENST00000486016 SMPD4Q9NXE4 827 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
GCFC2-209ENST00000486016 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 C1QTNF3-AMACRE9PGA6 284 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 DLX3O60479 287 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 B4GALT3O60512 393 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 MSCO60682 206 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 TCF3P15923 654 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 MLLT6P55198 1093 aaPredicted RBP6.59□□□□□ -1.35
GCFC2-209ENST00000486016 CHRNA2Q15822 529 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 TTC9BQ8N6N2 239 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 GPR27Q9NS67 375 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 PCDHB4Q9Y5E5 795 aa6.59□□□□□ -1.35
GCFC2-209ENST00000486016 IL13P35225 146 aa6.58□□□□□ -1.36
GCFC2-209ENST00000486016 HMGA2P52926 109 aa6.58□□□□□ -1.36
GCFC2-209ENST00000486016 PROSER1Q86XN7 944 aa6.58□□□□□ -1.36
GCFC2-209ENST00000486016 ZCCHC14Q8WYQ9 949 aaKnown RBP6.58□□□□□ -1.36
GCFC2-209ENST00000486016 LCORQ96JN0 433 aaPredicted RBP6.58□□□□□ -1.36
GCFC2-209ENST00000486016 GMLQ99445 158 aa6.58□□□□□ -1.36
GCFC2-209ENST00000486016 PDGFDQ9GZP0 370 aaPredicted RBP6.58□□□□□ -1.36
GCFC2-209ENST00000486016 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
GCFC2-209ENST00000486016 EPB41L1Q9H4G0 881 aa6.58□□□□□ -1.36
GCFC2-209ENST00000486016 KLF4O43474 513 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 COL6A1P12109 1028 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 ARID5AQ03989 594 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 GNL2Q13823 731 aaKnown RBP6.57□□□□□ -1.36
GCFC2-209ENST00000486016 PKN3Q6P5Z2 889 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 PHOSPHO1Q8TCT1 267 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 HNRNPLLQ8WVV9 542 aaKnown RBP6.57□□□□□ -1.36
GCFC2-209ENST00000486016 KCTD13Q8WZ19 329 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 PPP4R1LQ9P1A2 415 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 ASH2LQ9UBL3 628 aa6.57□□□□□ -1.36
GCFC2-209ENST00000486016 DGKIO75912 1065 aa6.56□□□□□ -1.36
GCFC2-209ENST00000486016 DDR2Q16832 855 aa6.56□□□□□ -1.36
GCFC2-209ENST00000486016 CPZQ66K79 652 aa6.56□□□□□ -1.36
GCFC2-209ENST00000486016 CYP4F22Q6NT55 531 aa6.56□□□□□ -1.36
GCFC2-209ENST00000486016 BORAQ6PGQ7 559 aa6.56□□□□□ -1.36
GCFC2-209ENST00000486016 FAM124AQ86V42 546 aa6.56□□□□□ -1.36
GCFC2-209ENST00000486016 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms