RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 PIDD1Q9HB75 910 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 FBXO40Q9UH90 709 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 PALD1Q9ULE6 856 aa11.47□□□□□ -0.57
SRGAP3-207ENST00000485983 CPP00450 1065 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 SOX5P35711 763 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 SLC16A2P36021 539 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 IL1RL1Q01638 556 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 TCP11Q8WWU5 503 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 FGD4Q96M96 766 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 SART1O43290 800 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 ASNSP08243 561 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 USP17L8P0C7I0 530 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 NNMTP40261 264 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 DNAJC24Q6P3W2 148 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 ABCF3Q9NUQ8 709 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 ITM2BQ9Y287 266 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 FAN1Q9Y2M0 1017 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 OSTNP61366 133 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 ME3Q16798 604 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 IL17REQ8NFR9 667 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 COA1Q9GZY4 146 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 Q9H521 79 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 TRIM35Q9UPQ4 493 aa11.46□□□□□ -0.57
SRGAP3-207ENST00000485983 A0A0D9SFI3 127 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 SMIM24O75264 130 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 MMP10P09238 476 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 PMLP29590 882 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 SPATA1Q5VX52 437 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 ZNF653Q96CK0 615 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 PRPSAP2O60256 369 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 ZNF18P17022 549 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 SLC12A1Q13621 1099 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 PTPROQ16827 1216 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 KRBA2Q6ZNG9 492 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 HAUS4Q9H6D7 363 aa11.46□□□□□ -0.58
SRGAP3-207ENST00000485983 AFPP02771 609 aaKnown RBP11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 UNC5CLQ8IV45 518 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 LRRC8CQ8TDW0 803 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 NLRP4Q96MN2 994 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 RABEP2Q9H5N1 569 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 GPR108Q9NPR9 543 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 HOXC10Q9NYD6 342 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 KIF24Q5T7B8 1368 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 NEMP1O14524 444 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 GNGT2O14610 69 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 SLFN12LQ6IEE8 588 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 TRIM42Q8IWZ5 723 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 URGCPQ8TCY9 931 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 K7ERI5 159 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 NOP14P78316 857 aaKnown RBP11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 ZNF341Q9BYN7 854 aa11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 TOPORSQ9NS56 1045 aaPredicted RBP11.45□□□□□ -0.58
SRGAP3-207ENST00000485983 DENND3A2RUS2 1198 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 MARK3P27448 753 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 GIMAP8Q8ND71 665 aaPredicted RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 PPP2R3CQ969Q6 453 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 PCIF1Q9H4Z3 704 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 ORC6Q9Y5N6 252 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 IFNA8P32881 189 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 GRAPQ13588 217 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 RNF207Q6ZRF8 634 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 BZW1Q7L1Q6 419 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 GRAPLQ8TC17 118 aaPredicted RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 MAGOHBQ96A72 148 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 MTRQ99707 1265 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 MTIF3Q9H2K0 278 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 SUCLA2Q9P2R7 463 aaPredicted RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 POC1B-GALNT4F8VUJ3 575 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 C21orf2O43822 256 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 EVI5O60447 810 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 BAG2O95816 211 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 EIF2AK2P19525 551 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 DARS2Q6PI48 645 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 CFAP61Q8NHU2 1237 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 FAM167AQ96KS9 214 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 CNOT6LQ96LI5 555 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 PIGSQ96S52 555 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 TMEM247A6NEH6 219 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 ALCAMQ13740 583 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 MFSD14CQ5VZR4 134 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 OR6B3Q8NGW1 331 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 TBCKQ8TEA7 893 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms