RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 SENP6Q9GZR1 1112 aaPredicted RBP13.51□□□□□ -0.25
HPS4-214ENST00000485842 Q9Y3F1 56 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 UBIAD1Q9Y5Z9 338 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 CCDC194A0A1B0GVG4 234 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 KRT2P35908 639 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 ACLYP53396 1101 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
HPS4-214ENST00000485842 SP2Q02086 613 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 ARHGAP1Q07960 439 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 MTMR1Q13613 665 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 KRT25Q7Z3Z0 450 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 DHX37Q8IY37 1157 aaKnown RBP13.5□□□□□ -0.25
HPS4-214ENST00000485842 PCSK9Q8NBP7 692 aaKnown RBP13.5□□□□□ -0.25
HPS4-214ENST00000485842 CYP2W1Q8TAV3 490 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 TBCKQ8TEA7 893 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 GPRASP2Q96D09 838 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 PHF24Q9UPV7 400 aa13.5□□□□□ -0.25
HPS4-214ENST00000485842 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
HPS4-214ENST00000485842 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 SPATA31C2B4DYI2 1134 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 M0R2N6 131 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 ZEB2O60315 1214 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 MMP1P03956 469 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 ASGR1P07306 291 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 MYL3P08590 195 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 TGFB3P10600 412 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 COL6A1P12109 1028 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 GJB2P29033 226 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 ICAM3P32942 547 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 CPT1AP50416 773 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 SP4Q02446 784 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 NR5A1Q13285 461 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
HPS4-214ENST00000485842 INF2Q27J81 1249 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 CEP55Q53EZ4 464 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 BRDTQ58F21 947 aaPredicted RBP13.49□□□□□ -0.25
HPS4-214ENST00000485842 CCSAPQ6IQ19 270 aaPredicted RBP13.49□□□□□ -0.25
HPS4-214ENST00000485842 PLA2G4DQ86XP0 818 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 DIS3L2Q8IYB7 885 aaKnown RBP13.49□□□□□ -0.25
HPS4-214ENST00000485842 AFG1LQ8WV93 481 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 VTI1AQ96AJ9 217 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 CDHR1Q96JP9 859 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
HPS4-214ENST00000485842 HTATIP2Q9BUP3 242 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 BRCA2P51587 3418 aa13.49□□□□□ -0.25
HPS4-214ENST00000485842 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 MOXD2PA6NHM9 499 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 FAM86B1E9PN63 330 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
HPS4-214ENST00000485842 MMP3P08254 477 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 CYP3A4P08684 503 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 FAM86B2P0C5J1 330 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 ARP10275 920 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 NKX3-2P78367 333 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 NEDD9Q14511 834 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
HPS4-214ENST00000485842 CELF3Q5SZQ8 465 aaKnown RBP13.48□□□□□ -0.25
HPS4-214ENST00000485842 CXCL17Q6UXB2 119 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 PIK3AP1Q6ZUJ8 805 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 CYFIP1Q7L576 1253 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 GLT1D1Q96MS3 346 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 SPATA33Q96N06 139 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 STARD7Q9NQZ5 370 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 KCNH7Q9NS40 1196 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
HPS4-214ENST00000485842 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.48□□□□□ -0.25
HPS4-214ENST00000485842 BTBD18B2RXH4 712 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 NOP56O00567 594 aaKnown RBP13.47□□□□□ -0.25
HPS4-214ENST00000485842 ATP9AO75110 1047 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 CUL4AQ13619 759 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
HPS4-214ENST00000485842 LRRC26Q2I0M4 334 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 PRR16Q569H4 304 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 DPF3Q92784 378 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 EMID1Q96A84 441 aaPredicted RBP13.47□□□□□ -0.25
HPS4-214ENST00000485842 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
HPS4-214ENST00000485842 IGLV3-22A0A075B6J6 115 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 A6NJR5 290 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 MEIS1O00470 390 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 MAFGO15525 162 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 TDP2O95551 362 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 KCNA2P16389 499 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 CHMP4BP1P59074 171 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 PSMC6P62333 389 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms