RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 GOLM1Q8NBJ4 401 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 RNF34Q969K3 372 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 TMEM74Q96NL1 305 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 APBA2Q99767 749 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 MCOLN1Q9GZU1 580 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 C19orf44Q9H6X5 657 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 LZTS1Q9Y250 596 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 ADGRF5Q8IZF2 1346 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 MAPK8IP3Q9UPT6 1336 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 FRMPD1Q5SYB0 1578 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 HECW2Q9P2P5 1572 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 PIK3C2BO00750 1634 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 ASXL2Q76L83 1435 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 POGZQ7Z3K3 1410 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 PPLO60437 1756 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 A0A0G2JLL6 359 aaPredicted RBP4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 CHURC1-FNTBB4DL54 471 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 APAF1O14727 1248 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 HIP1RO75146 1068 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 LRRN2O75325 713 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 BPNT1O95861 308 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 ATICP31939 592 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 GNALP38405 381 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 CASP2P42575 452 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 KIR3DL1P43629 444 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 TRAPPC10P48553 1259 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 NEXNQ0ZGT2 675 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 MRPL58Q14197 206 aaKnown RBP4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 TMPRSS7Q7RTY8 843 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 ANKRD23Q86SG2 305 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 CREG2Q8IUH2 290 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 CHPFQ8IZ52 775 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 LSM14AQ8ND56 463 aaKnown RBP4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 FAM13CQ8NE31 585 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 DNAJB8Q8NHS0 232 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 PPP1R13LQ8WUF5 828 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 GATAD2BQ8WXI9 593 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 RHOVQ96L33 236 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 SLC26A8Q96RN1 970 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 ACBD3Q9H3P7 528 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 GCM1Q9NP62 436 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 PARD6AQ9NPB6 346 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 KBTBD4Q9NVX7 518 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 EBF1Q9UH73 591 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 KLHL3Q9UH77 587 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 POLR3KQ9Y2Y1 108 aaPredicted RBP4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 EID1Q9Y6B2 187 aa4.78□□□□□ -1.64
PRPF38B-205ENST00000485810 SHPRHQ149N8 1683 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 NEO1Q92859 1461 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 ABCC3O15438 1527 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 ADGRB2O60241 1585 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 UGGT1Q9NYU2 1555 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 CCDC163A0A0D9SF12 145 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 TBX3O15119 743 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 DNAJA2O60884 412 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 MYL1P05976 194 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 RAC2P15153 192 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 CDC37Q16543 378 aaPredicted RBP4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 SNAP47Q5SQN1 464 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 METTL16Q86W50 562 aaKnown RBP4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 VPS37DQ86XT2 251 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 TEX19Q8NA77 164 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 VPS37AQ8NEZ2 397 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 BAHD1Q8TBE0 780 aaPredicted RBP4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 RSPH1Q8WYR4 309 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 ARPC5LQ9BPX5 153 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 RSRP1Q9BUV0 290 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 SRRTQ9BXP5 876 aaKnown RBP4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 METTL5Q9NRN9 209 aaKnown RBP4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 REV1Q9UBZ9 1251 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 CEP131Q9UPN4 1083 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 TACC3Q9Y6A5 838 aa4.77□□□□□ -1.65
PRPF38B-205ENST00000485810 MROH2AA6NES4 1674 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 ANKRD36BQ8N2N9 1353 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 NSD3Q9BZ95 1437 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 GOLGA6L6A8MZA4 724 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 ZGLP1P0C6A0 271 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 GARTP22102 1010 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 CYP7A1P22680 504 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 TPP2P29144 1249 aaPredicted RBP4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 DLG4P78352 724 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 AMPD3Q01432 767 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 SYCP2LQ5T4T6 812 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 FBXL19Q6PCT2 694 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 HSCBQ8IWL3 235 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 PIWIL2Q8TC59 973 aaKnown RBP4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 KCNC2Q96PR1 638 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 IER2Q9BTL4 223 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 ADAM30Q9UKF2 790 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 INPP5FQ9Y2H2 1132 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 USP19O94966 1318 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 IL16Q14005 1332 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 SYNRGQ9UMZ2 1314 aa4.76□□□□□ -1.65
PRPF38B-205ENST00000485810 NLRP1Q9C000 1473 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 NEXMIFQ5QGS0 1516 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 VIRMAQ69YN4 1812 aaKnown RBP4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 DYTNA2CJ06 578 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 HTR3BO95264 441 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms