RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ACSF2Q96CM8 615 aaPredicted RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 CCDC74BQ96LY2 380 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.29□□□□□ -1.56
RTN4-213ENST00000485749 CDH19Q9H159 772 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 RANBP17Q9H2T7 1088 aaKnown RBP5.29□□□□□ -1.56
RTN4-213ENST00000485749 TRIM39Q9HCM9 518 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 LRP2BPQ9P2M1 347 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 TAGLN3Q9UI15 199 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 PCOLCE2Q9UKZ9 415 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 DAAM1Q9Y4D1 1078 aa5.29□□□□□ -1.56
RTN4-213ENST00000485749 ABCC9O60706 1549 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 GTPBP10A4D1E9 387 aaKnown RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 FAM83GA6ND36 823 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 TMPRSS2O15393 492 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 KIF1CO43896 1103 aaKnown RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 ZNF862O60290 1169 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 KATNA1O75449 491 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 RFPL1O75677 317 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 SCGB1D2O95969 90 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 CCDC175P0C221 793 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 U2AF1L5P0DN76 240 aaPredicted RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 GRK4P32298 578 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 DDIT3P35638 169 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 U2AF1Q01081 240 aaKnown RBP eCLIP5.28□□□□□ -1.56
RTN4-213ENST00000485749 SATB1Q01826 763 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 MTMR1Q13613 665 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 TSHZ3Q63HK5 1081 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 HEATR6Q6AI08 1181 aaKnown RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 ZNF574Q6ZN55 896 aaPredicted RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 MMS22LQ6ZRQ5 1243 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 SPATS2Q86XZ4 545 aaKnown RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 MRPL41Q8IXM3 137 aaKnown RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 ARL6IP6Q8N6S5 226 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 GSTCDQ8NEC7 633 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 TTC8Q8TAM2 541 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 LEO1Q8WVC0 666 aaPredicted RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 OSBP2Q969R2 916 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 TBC1D31Q96DN5 1066 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 FAM84AQ96KN4 292 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 HAUS7Q99871 368 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 ORAI3Q9BRQ5 295 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 PDGFDQ9GZP0 370 aaPredicted RBP5.28□□□□□ -1.56
RTN4-213ENST00000485749 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.28□□□□□ -1.56
RTN4-213ENST00000485749 CSRNP2Q9H175 543 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 YY1AP1Q9H869 796 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 LGR6Q9HBX8 967 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 CD248Q9HCU0 757 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 CRIM1Q9NZV1 1036 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 ZIM2Q9NZV7 527 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 LUZP4Q9P127 313 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 KLHL3Q9UH77 587 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 IP6K2Q9UHH9 426 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 MAFFQ9ULX9 164 aa5.28□□□□□ -1.56
RTN4-213ENST00000485749 B4E1Z4 1266 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 RNGTTO60942 597 aaKnown RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 CEACAM5P06731 702 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 ITGAVP06756 1048 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 CD8BP10966 210 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 NEFHP12036 1026 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 OAS2P29728 719 aaKnown RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 ERVK-24P63145 666 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 TMED1Q13445 227 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 BIRC3Q13489 604 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 PIN1Q13526 163 aaPredicted RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 STAT4Q14765 748 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 KIF22Q14807 665 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 LRRC41Q15345 812 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 FAM102BQ5T8I3 360 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 YOD1Q5VVQ6 348 aaPredicted RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 PPP4R3AQ6IN85 833 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 SLC23A3Q6PIS1 610 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 POMZP3Q6PJE2 187 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 CPLX2Q6PUV4 134 aaKnown RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 SPRED2Q7Z698 418 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 ZNF227Q86WZ6 799 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 KIF18BQ86Y91 864 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 TMEM192Q8IY95 271 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 IFNL2Q8IZJ0 200 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 SPICE1Q8N0Z3 855 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 PLD6Q8N2A8 252 aaKnown RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 CRACR2BQ8N4Y2 399 aaPredicted RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 LRRN4CLQ8ND94 238 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 FAM13CQ8NE31 585 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 BVESQ8NE79 360 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 ITFG2Q969R8 447 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 RCC1LQ96I51 464 aaKnown RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 ZNF496Q96IT1 587 aaPredicted RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 CCDC140Q96MF4 163 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 SLC6A18Q96N87 628 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 FANCD2OSQ96PS1 177 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 C22orf23Q9BZE7 217 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 KLHL25Q9H0H3 589 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 GBP3Q9H0R5 595 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 SSU72Q9NP77 194 aaKnown RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 NGRNQ9NPE2 291 aaKnown RBP5.27□□□□□ -1.57
RTN4-213ENST00000485749 RIC8AQ9NPQ8 531 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 KMT5AQ9NQR1 393 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 SNX11Q9Y5W9 270 aa5.27□□□□□ -1.57
RTN4-213ENST00000485749 A0A087WZG4 1122 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 ERICH4A6NGS2 130 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms