RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 ZNF214Q9UL59 606 aaPredicted RBP10.73□□□□□ -0.69
CTSA-208ENST00000485627 A0A087X0B3 334 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 PP2D1A8MPX8 630 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 BECN2A8MW95 431 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 FAM86B1E9PN63 330 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 BIN1O00499 593 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 FAM86B2P0C5J1 330 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 CHRM1P11229 460 aaPredicted RBP10.72□□□□□ -0.69
CTSA-208ENST00000485627 CETPP11597 493 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 COPB2P35606 906 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 NLRP12P59046 1061 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 HERVK_113P62684 666 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 AMPD3Q01432 767 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 BAATQ14032 418 aaPredicted RBP10.72□□□□□ -0.69
CTSA-208ENST00000485627 UVSSAQ2YD98 709 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 CEP55Q53EZ4 464 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 SNX29Q8TEQ0 813 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 HAS1Q92839 578 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 PAGE5Q96GU1 130 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
CTSA-208ENST00000485627 PAGR1Q9BTK6 254 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 DNAJC25Q9H1X3 360 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 RIPK3Q9Y572 518 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 OTOFQ9HC10 1997 aa10.72□□□□□ -0.69
CTSA-208ENST00000485627 POTEMA6NI47 508 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 GOLGA6L19H0YKK7 550 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 SLC26A4O43511 780 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 SLC25A27O95847 323 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.69
CTSA-208ENST00000485627 EIF2AK2P19525 551 aaKnown RBP10.71□□□□□ -0.69
CTSA-208ENST00000485627 CCND2P30279 289 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 GJA5P36382 358 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 CCT6AP40227 531 aaKnown RBP10.71□□□□□ -0.69
CTSA-208ENST00000485627 ZNF165P49910 485 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 E2F4Q16254 413 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 PCNX4Q63HM2 1172 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 HAUS3Q68CZ6 603 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 RGMBQ6NW40 437 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 XRRA1Q6P2D8 792 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 SLC30A10Q6XR72 485 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 NCAPG2Q86XI2 1143 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 RPTORQ8N122 1335 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 ETNPPLQ8TBG4 499 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 CCDC47Q96A33 483 aaKnown RBP10.71□□□□□ -0.69
CTSA-208ENST00000485627 TAAR1Q96RJ0 339 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 RMDN3Q96TC7 470 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 PLIN2Q99541 437 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 MXRA8Q9BRK3 442 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 SPATC1LQ9H0A9 340 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 NT5C3AQ9H0P0 336 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 DACH1Q9UI36 760 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 TUBE1Q9UJT0 475 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 KDM3AQ9Y4C1 1321 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 PCDHA5Q9Y5H7 936 aa10.71□□□□□ -0.69
CTSA-208ENST00000485627 PFASO15067 1338 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 CCL15-CCL14A0A0B4J2E2 113 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 MSH4O15457 936 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 MYL1P05976 194 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 ZBTB48P10074 688 aaPredicted RBP10.7□□□□□ -0.7
CTSA-208ENST00000485627 MYCLP12524 364 aaPredicted RBP10.7□□□□□ -0.7
CTSA-208ENST00000485627 PLCG1P19174 1290 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 TPM4P67936 248 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 MDM2Q00987 491 aaPredicted RBP10.7□□□□□ -0.7
CTSA-208ENST00000485627 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
CTSA-208ENST00000485627 CCL15Q16663 113 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 LRCH2Q5VUJ6 765 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 NCAPH2Q6IBW4 605 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 SV2BQ7L1I2 683 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 NIPA1Q7RTP0 329 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 SH3RF1Q7Z6J0 888 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 CTU1Q7Z7A3 348 aaKnown RBP10.7□□□□□ -0.7
CTSA-208ENST00000485627 RIOX2Q8IUF8 465 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 GRAMD1CQ8IYS0 662 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 TRIML1Q8N9V2 468 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 NSUN6Q8TEA1 469 aaKnown RBP10.7□□□□□ -0.7
CTSA-208ENST00000485627 SMCR8Q8TEV9 937 aaPredicted RBP10.7□□□□□ -0.7
CTSA-208ENST00000485627 GSDMAQ96QA5 445 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 UIMC1Q96RL1 719 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 ZNF577Q9BSK1 485 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 LRRC27Q9C0I9 530 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 CBX8Q9HC52 389 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 PXMP2Q9NR77 195 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 RMND1Q9NWS8 449 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 BTBD7Q9P203 1132 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 COL20A1Q9P218 1284 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 STK17AQ9UEE5 414 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 TCEAL9Q9UHQ7 104 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
CTSA-208ENST00000485627 B4DLN1 442 aa10.69□□□□□ -0.7
CTSA-208ENST00000485627 MEIS1O00470 390 aa10.69□□□□□ -0.7
CTSA-208ENST00000485627 GAS7O60861 476 aa10.69□□□□□ -0.7
CTSA-208ENST00000485627 BCRP11274 1271 aa10.69□□□□□ -0.7
CTSA-208ENST00000485627 ZNF157P51786 506 aaPredicted RBP10.69□□□□□ -0.7
CTSA-208ENST00000485627 PGM5Q15124 567 aa10.69□□□□□ -0.7
CTSA-208ENST00000485627 SPRYD7Q5W111 196 aa10.69□□□□□ -0.7
CTSA-208ENST00000485627 ISM2Q6H9L7 571 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms