RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 JADE2Q9NQC1 790 aa9.41□□□□□ -0.9
SF3A1-208ENST00000485618 XPNPEP3Q9NQH7 507 aa9.41□□□□□ -0.9
SF3A1-208ENST00000485618 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
SF3A1-208ENST00000485618 OGDHLQ9ULD0 1010 aa9.41□□□□□ -0.9
SF3A1-208ENST00000485618 NOL7Q9UMY1 257 aaKnown RBP9.41□□□□□ -0.9
SF3A1-208ENST00000485618 KCNJ14Q9UNX9 436 aa9.41□□□□□ -0.9
SF3A1-208ENST00000485618 LAMA3Q16787 3333 aa9.41□□□□□ -0.9
SF3A1-208ENST00000485618 PLXNA1Q9UIW2 1896 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 DYNC1LI2O43237 492 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 CABYRO75952 493 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 BAG4O95429 457 aaKnown RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 GH1P01241 217 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 MYCNP04198 464 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 CYP3A4P08684 503 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 GNASQ5JWF2 1037 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 KRT40Q6A162 431 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 Q7L0L9 218 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 FBXO16Q8IX29 292 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 DHX37Q8IY37 1157 aaKnown RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 DIS3L2Q8IYB7 885 aaKnown RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 TNPO1Q92973 898 aaKnown RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 SENP7Q9BQF6 1050 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 MXRA8Q9BRK3 442 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 SDF4Q9BRK5 362 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
SF3A1-208ENST00000485618 SEZ6LQ9BYH1 1024 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 MLXIPQ9HAP2 919 aa9.4□□□□□ -0.9
SF3A1-208ENST00000485618 MOXD2PA6NHM9 499 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 SPATA31C2B4DYI2 1134 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 DNM1LO00429 736 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 MEIS1O00470 390 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 NOP56O00567 594 aaKnown RBP9.39□□□□□ -0.91
SF3A1-208ENST00000485618 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
SF3A1-208ENST00000485618 C6orf222P0C671 652 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-208ENST00000485618 ICAM3P32942 547 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 TRAPPC10P48553 1259 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 LRIT3Q3SXY7 679 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 LHX8Q68G74 356 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 GPR153Q6NV75 609 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 TAPT1Q6NXT6 567 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 MOXD1Q6UVY6 613 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 NEK8Q86SG6 692 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 TLK2Q86UE8 772 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 TRPV1Q8NER1 839 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 OR6J1Q8NGC5 347 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 TBCKQ8TEA7 893 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 AIFM3Q96NN9 605 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 INPP4AQ96PE3 977 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-208ENST00000485618 TBC1D22BQ9NU19 505 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 TMEM260Q9NX78 707 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 RTEL1Q9NZ71 1219 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 UBIAD1Q9Y5Z9 338 aa9.39□□□□□ -0.91
SF3A1-208ENST00000485618 ASTN1O14525 1302 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 PPFIA4O75335 1185 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 COL6A1P12109 1028 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 SMPD1P17405 629 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 CIITAP33076 1130 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 GJA9P57773 515 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 MRPS9P82933 396 aaKnown RBP9.38□□□□□ -0.91
SF3A1-208ENST00000485618 ORC2Q13416 577 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-208ENST00000485618 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
SF3A1-208ENST00000485618 DGKDQ16760 1214 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 LRRC26Q2I0M4 334 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 LETM2Q2VYF4 491 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 PPP4R3AQ6IN85 833 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 CCDC62Q6P9F0 684 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 METTL7BQ6UX53 244 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 PIK3AP1Q6ZUJ8 805 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 PLA2G4DQ86XP0 818 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 NOSTRINQ8IVI9 506 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 EMID1Q96A84 441 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-208ENST00000485618 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 FAM20AQ96MK3 541 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 KATNBL1Q9H079 304 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 PDGFCQ9NRA1 345 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
SF3A1-208ENST00000485618 STXBP5LQ9Y2K9 1186 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 FRMPD3Q5JV73 1810 aa9.38□□□□□ -0.91
SF3A1-208ENST00000485618 CYP3A7-CYP3A51PA0A087WV96 503 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 BTBD18B2RXH4 712 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 M0R2N6 131 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 CCNT1O60563 726 aaKnown RBP9.37□□□□□ -0.91
SF3A1-208ENST00000485618 PGK1P00558 417 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 ITGB5P18084 799 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 CYP3A7P24462 503 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 FOSBP53539 338 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 NKX3-2P78367 333 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
SF3A1-208ENST00000485618 GUCY1B3Q02153 619 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 LY6KQ17RY6 165 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 Q4G0T1 1027 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 PRR16Q569H4 304 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms