RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 RRAGCQ9HB90 399 aa28.38■■■□□ 2.13
TNFRSF25-215ENST00000485036 KLRC4O43908 158 aa28.37■■■□□ 2.13
TNFRSF25-215ENST00000485036 PSMD10O75832 226 aa28.37■■■□□ 2.13
TNFRSF25-215ENST00000485036 CCT6AP40227 531 aaKnown RBP28.37■■■□□ 2.13
TNFRSF25-215ENST00000485036 AMPD3Q01432 767 aa28.37■■■□□ 2.13
TNFRSF25-215ENST00000485036 UIMC1Q96RL1 719 aa28.37■■■□□ 2.13
TNFRSF25-215ENST00000485036 FKBP1BP68106 108 aa28.36■■■□□ 2.13
TNFRSF25-215ENST00000485036 PLCB2Q00722 1185 aa28.36■■■□□ 2.13
TNFRSF25-215ENST00000485036 ERMNQ8TAM6 284 aa28.36■■■□□ 2.13
TNFRSF25-215ENST00000485036 PXMP2Q9NR77 195 aa28.36■■■□□ 2.13
TNFRSF25-215ENST00000485036 UBIAD1Q9Y5Z9 338 aa28.36■■■□□ 2.13
TNFRSF25-215ENST00000485036 ITGB5P18084 799 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 GJA5P36382 358 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 PPP2R5CQ13362 524 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 BAATQ14032 418 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 PGM5Q15124 567 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 SV2BQ7L1I2 683 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 FASTKD5Q7L8L6 764 aaKnown RBP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 KCNK18Q7Z418 384 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 PDCD2LQ9BRP1 358 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 ERCC5P28715 1186 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 IRX3P78415 501 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 MRPS9P82933 396 aaKnown RBP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 FMR1Q06787 632 aaKnown RBP eCLIP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 ZNF658Q5TYW1 1059 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 NCAPH2Q6IBW4 605 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 CNNM4Q6P4Q7 775 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 CHST13Q8NET6 341 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 RMDN3Q96TC7 470 aa28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 ASCC2Q9H1I8 757 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF25-215ENST00000485036 ARP10275 920 aa28.34■■■□□ 2.13
TNFRSF25-215ENST00000485036 RPA1P27694 616 aa28.34■■■□□ 2.13
TNFRSF25-215ENST00000485036 LRCH2Q5VUJ6 765 aa28.34■■■□□ 2.13
TNFRSF25-215ENST00000485036 OTOP1Q7RTM1 612 aa28.34■■■□□ 2.13
TNFRSF25-215ENST00000485036 HSD3B7Q9H2F3 369 aa28.34■■■□□ 2.13
TNFRSF25-215ENST00000485036 BTBD7Q9P203 1132 aa28.34■■■□□ 2.13
TNFRSF25-215ENST00000485036 POTEB3A0JP26 581 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 MED24O75448 989 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 RHOBTB3O94955 611 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 TPM4P67936 248 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 MCM6Q14566 821 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 XRRA1Q6P2D8 792 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 POTEBQ6S5H4 581 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 B3GNT9Q6UX72 402 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 RIOX2Q8IUF8 465 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 ENOX1Q8TC92 643 aaKnown RBP28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 A1CFQ9NQ94 594 aaKnown RBP28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 CYP39A1Q9NYL5 469 aa28.33■■■□□ 2.13
TNFRSF25-215ENST00000485036 CD44P16070 742 aaKnown RBP28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 EIF2AK2P19525 551 aaKnown RBP28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 PLS1Q14651 629 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 SLC10A4Q96EP9 437 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 RIT2Q99578 217 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 ZNF577Q9BSK1 485 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 LRRC27Q9C0I9 530 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 ZNF408Q9H9D4 720 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 JADE2Q9NQC1 790 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 PPP1R3GB7ZBB8 358 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 ZNF75DP51815 510 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 HERVK_113P62684 666 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 PABPC4Q13310 644 aaKnown RBP eCLIP28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 SNAPC2Q13487 334 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 KMT5BQ4FZB7 885 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 GPAT2Q6NUI2 795 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 KCTD17Q8N5Z5 321 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 POLR3CQ9BUI4 534 aaPredicted RBP28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 WDR11Q9BZH6 1224 aa28.32■■■□□ 2.12
TNFRSF25-215ENST00000485036 IPO5O00410 1097 aaKnown RBP28.31■■■□□ 2.12
TNFRSF25-215ENST00000485036 SPATA31C1P0DKV0 1188 aa28.31■■■□□ 2.12
TNFRSF25-215ENST00000485036 CATSPER3Q86XQ3 398 aa28.31■■■□□ 2.12
TNFRSF25-215ENST00000485036 ZFP91Q96JP5 570 aaPredicted RBP28.31■■■□□ 2.12
TNFRSF25-215ENST00000485036 MED15Q96RN5 788 aa28.31■■■□□ 2.12
TNFRSF25-215ENST00000485036 KCNH7Q9NS40 1196 aa28.31■■■□□ 2.12
TNFRSF25-215ENST00000485036 KIAA1024Q9UPX6 916 aa28.31■■■□□ 2.12
TNFRSF25-215ENST00000485036 MYMKA6NI61 221 aa28.3■■■□□ 2.12
TNFRSF25-215ENST00000485036 GAS7O60861 476 aa28.3■■■□□ 2.12
TNFRSF25-215ENST00000485036 ARHGEF16Q5VV41 709 aa28.3■■■□□ 2.12
TNFRSF25-215ENST00000485036 TRIM5Q9C035 493 aa28.3■■■□□ 2.12
TNFRSF25-215ENST00000485036 SPATC1LQ9H0A9 340 aa28.3■■■□□ 2.12
TNFRSF25-215ENST00000485036 GBA2Q9HCG7 927 aaPredicted RBP28.3■■■□□ 2.12
TNFRSF25-215ENST00000485036 FBXO40Q9UH90 709 aa28.3■■■□□ 2.12
TNFRSF25-215ENST00000485036 EML1O00423 815 aa28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 CNMDO75829 334 aa28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 ASIC1P78348 528 aa28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 HS1BP3Q53T59 392 aa28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 SMYD4Q8IYR2 804 aaPredicted RBP28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 PURBQ96QR8 312 aaKnown RBP28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 TRIM44Q96DX7 344 aaPredicted RBP28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 EIF2AK1Q9BQI3 630 aaKnown RBP28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 TEKT3Q9BXF9 490 aa28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 GTPBP4Q9BZE4 634 aaKnown RBP28.29■■■□□ 2.12
TNFRSF25-215ENST00000485036 PVALEFA0A1B0GWK0 134 aa28.28■■■□□ 2.12
TNFRSF25-215ENST00000485036 CCND2P30279 289 aa28.28■■■□□ 2.12
TNFRSF25-215ENST00000485036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.28■■■□□ 2.12
TNFRSF25-215ENST00000485036 VSIG10LQ86VR7 867 aa28.28■■■□□ 2.12
TNFRSF25-215ENST00000485036 GIMAP8Q8ND71 665 aaPredicted RBP28.28■■■□□ 2.12
TNFRSF25-215ENST00000485036 NSUN6Q8TEA1 469 aaKnown RBP28.28■■■□□ 2.12
TNFRSF25-215ENST00000485036 CCDC47Q96A33 483 aaKnown RBP28.28■■■□□ 2.12
TNFRSF25-215ENST00000485036 MRFAP1L1Q96HT8 127 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms