RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 LINC00482Q8N8I6 264 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 KREMEN2Q8NCW0 462 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 BORCS6Q96GS4 357 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 SGSM3Q96HU1 749 aa6.54□□□□□ -1.36
SMC4-215ENST00000484799 SPATA6Q9NWH7 488 aaPredicted RBP6.54□□□□□ -1.36
SMC4-215ENST00000484799 ZNF536O15090 1300 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 K7ESM1 405 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 PRODHO43272 600 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 RPL13P26373 211 aaKnown RBP6.53□□□□□ -1.36
SMC4-215ENST00000484799 CNR2P34972 360 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 RGL3Q3MIN7 710 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 ZFYVE27Q5T4F4 411 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 MCTP2Q6DN12 878 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 NSMFQ6X4W1 530 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 DBX2Q6ZNG2 339 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 EP400NLQ6ZTU2 488 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 ADAMTS17Q8TE56 1095 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 AARSD1Q9BTE6 412 aaKnown RBP6.53□□□□□ -1.36
SMC4-215ENST00000484799 SMOC1Q9H4F8 434 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 GPR27Q9NS67 375 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 ZNF652Q9Y2D9 606 aa6.53□□□□□ -1.36
SMC4-215ENST00000484799 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 DDX3XO00571 662 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMC4-215ENST00000484799 NOBOXO60393 691 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 GRIA2P42262 883 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 SPIRE1Q08AE8 756 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 IFRD2Q12894 506 aaPredicted RBP6.52□□□□□ -1.37
SMC4-215ENST00000484799 CELF2-AS1Q8N7Q2 184 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 PHOSPHO1Q8TCT1 267 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 DCAF4Q8WV16 495 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 PHF20Q9BVI0 1012 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 PODXL2Q9NZ53 605 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 MYOTQ9UBF9 498 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 CROTQ9UKG9 612 aa6.52□□□□□ -1.37
SMC4-215ENST00000484799 TRAV20A0A0B4J274 112 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 MROH6A6NGR9 719 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 PRICKLE3O43900 615 aaPredicted RBP6.51□□□□□ -1.37
SMC4-215ENST00000484799 ATP2B1P20020 1258 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 THBS2P35442 1172 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 CYP4F3Q08477 520 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 TESK1Q15569 626 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 ZNF827Q17R98 1081 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 SPATS1Q496A3 300 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 SLC35F1Q5T1Q4 408 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 RSPO2Q6UXX9 243 aaPredicted RBP6.51□□□□□ -1.37
SMC4-215ENST00000484799 ZNF761Q86XN6 746 aaPredicted RBP6.51□□□□□ -1.37
SMC4-215ENST00000484799 LGI4Q8N135 537 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 ST13P5Q8NFI4 369 aaPredicted RBP6.51□□□□□ -1.37
SMC4-215ENST00000484799 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMC4-215ENST00000484799 LCORQ96JN0 433 aaPredicted RBP6.51□□□□□ -1.37
SMC4-215ENST00000484799 GMLQ99445 158 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 GPR20Q99678 358 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 CDC6Q99741 560 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 JAM3Q9BX67 310 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 DTLQ9NZJ0 730 aa6.51□□□□□ -1.37
SMC4-215ENST00000484799 ARNTLO00327 626 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 GNAT1P11488 350 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 ITGA1P56199 1179 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 ZC3H6P61129 1189 aaKnown RBP6.5□□□□□ -1.37
SMC4-215ENST00000484799 RAB33AQ14088 237 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
SMC4-215ENST00000484799 FAM26FQ5R3K3 315 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 NLRP10Q86W26 655 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 Q8N1Y9 231 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 ARRDC4Q8NCT1 418 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 WRNIP1Q96S55 665 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 KCNJ15Q99712 375 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 ALG1Q9BT22 464 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 LNPKQ9C0E8 428 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 TMEM168Q9H0V1 697 aa6.5□□□□□ -1.37
SMC4-215ENST00000484799 TCRBV5S2A0A599 114 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 CCDC85CA6NKD9 419 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 DLX3O60479 287 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 TADA3O75528 432 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 PABPC1P11940 636 aaKnown RBP6.49□□□□□ -1.37
SMC4-215ENST00000484799 DLX2Q07687 328 aaPredicted RBP6.49□□□□□ -1.37
SMC4-215ENST00000484799 KIZQ2M2Z5 673 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 DENND5AQ6IQ26 1287 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 CYP4F22Q6NT55 531 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 IFNL3Q8IZI9 196 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 CHST13Q8NET6 341 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 SYT3Q9BQG1 590 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 SLC6A20Q9NP91 592 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 JADE2Q9NQC1 790 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 FTSJ1Q9UET6 329 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 NPFFR2Q9Y5X5 522 aa6.49□□□□□ -1.37
SMC4-215ENST00000484799 KLF4O43474 513 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 FBXO21O94952 628 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 ADRB1P08588 477 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 FGFR1P11362 822 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 IL13P35225 146 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 SURF1Q15526 300 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 CR1LQ2VPA4 569 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 TEPPQ6URK8 271 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 GLB1LQ6UWU2 654 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 TXNDC5Q8NBS9 432 aaKnown RBP6.48□□□□□ -1.37
SMC4-215ENST00000484799 PIP4K2CQ8TBX8 421 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms