RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 HCN4Q9Y3Q4 1203 aa11.58□□□□□ -0.56
CPSF4-213ENST00000484112 FAM86C2PA6NEL3 165 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 CCDC69A6NI79 296 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 LPXNO60711 386 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 GH1P01241 217 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 SELPP16109 830 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 EDNRBP24530 442 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 WDR5P61964 334 aaKnown RBP11.57□□□□□ -0.56
CPSF4-213ENST00000484112 DEFB103AP81534 67 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
CPSF4-213ENST00000484112 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 LRRC8DQ7L1W4 858 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 SAMD3Q8N6K7 520 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 RGS22Q8NE09 1264 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-213ENST00000484112 CAGE1Q8TC20 777 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 AFAP1L1Q8TED9 768 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 TBC1D5Q92609 795 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 ALG1Q9BT22 464 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 USP26Q9BXU7 913 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 MAD2L2Q9UI95 211 aa11.57□□□□□ -0.56
CPSF4-213ENST00000484112 KLRF2D3W0D1 207 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 MMP3P08254 477 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 CASTP20810 708 aaKnown RBP11.56□□□□□ -0.56
CPSF4-213ENST00000484112 ANAPC15P60006 121 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 GPNMBQ14956 572 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 CNKSR3Q6P9H4 555 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 ADGRF4Q8IZF3 695 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 ZNF654Q8IZM8 581 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 C7orf31Q8N865 590 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPSF4-213ENST00000484112 MTMR8Q96EF0 704 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 TAAR1Q96RJ0 339 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 TM6SF1Q9BZW5 370 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 RIOX1Q9H6W3 641 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 SNX14Q9Y5W7 946 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 ABCB11O95342 1321 aa11.56□□□□□ -0.56
CPSF4-213ENST00000484112 NBNO60934 754 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 CKBP12277 381 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 CDC37Q16543 378 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-213ENST00000484112 TCTN1Q2MV58 587 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 CCDC62Q6P9F0 684 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 BLOC1S2Q6QNY1 142 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 MCF2L2Q86YR7 1114 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 DHX38Q92620 1227 aaKnown RBP11.55□□□□□ -0.56
CPSF4-213ENST00000484112 KAT2BQ92831 832 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 JMJD4Q9H9V9 463 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 SUGCTQ9HAC7 445 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 MAP3K20Q9NYL2 800 aaKnown RBP11.55□□□□□ -0.56
CPSF4-213ENST00000484112 HDAC6Q9UBN7 1215 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 MUC3AQ02505 3323 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 SCN10AQ9Y5Y9 1956 aa11.55□□□□□ -0.56
CPSF4-213ENST00000484112 ZBTB5O15062 677 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 SORBS3O60504 671 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 GJB5O95377 273 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 PSEN2P49810 448 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 ARHGAP1Q07960 439 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 IKBKEQ14164 716 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 STXBP2Q15833 593 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 DGKDQ16760 1214 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 ADCK5Q3MIX3 580 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 ARHGEF16Q5VV41 709 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 SESTD1Q86VW0 696 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 TEX2Q8IWB9 1127 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 SYTL5Q8TDW5 730 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 NSUN6Q8TEA1 469 aaKnown RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 JAKMIP1Q96N16 626 aaKnown RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 TGS1Q96RS0 853 aaKnown RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 RMDN3Q96TC7 470 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 RAD9AQ99638 391 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 SPZ1Q9BXG8 430 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 AMNQ9BXJ7 453 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 AGXT2Q9BYV1 514 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 VAT1LQ9HCJ6 419 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 CD320Q9NPF0 282 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 RBM28Q9NW13 759 aaKnown RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 LMCD1Q9NZU5 365 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 COL20A1Q9P218 1284 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 GTF2IRD1Q9UHL9 959 aa11.54□□□□□ -0.56
CPSF4-213ENST00000484112 MRPL11Q9Y3B7 192 aaKnown RBP11.54□□□□□ -0.56
CPSF4-213ENST00000484112 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 CCDC196A0A1B0GTZ2 297 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 ABHD14A-ACY1A0A1B0GW23 586 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 LINC01553A4QN01 128 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 PARNO95453 639 aaKnown RBP11.53□□□□□ -0.56
CPSF4-213ENST00000484112 CXCL10P02778 98 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 ZNF286BP0CG31 522 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
CPSF4-213ENST00000484112 KCNA5P22460 613 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 RPS6KB1P23443 525 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 ERVK-21P61565 698 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms