RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 LMOD3Q0VAK6 560 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 MAPRE1Q15691 268 aaKnown RBP5.6□□□□□ -1.51
PTCD3-214ENST00000483925 GNPTABQ3T906 1256 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 SYDE2Q5VT97 1194 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 TCERG1LQ5VWI1 586 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 SMAP1Q8IYB5 467 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-214ENST00000483925 SPICE1Q8N0Z3 855 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 ENAHQ8N8S7 591 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-214ENST00000483925 MYRIPQ8NFW9 859 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 ENOX1Q8TC92 643 aaKnown RBP5.6□□□□□ -1.51
PTCD3-214ENST00000483925 ATG4CQ96DT6 458 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 SARGQ9BW04 601 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-214ENST00000483925 PPCSQ9HAB8 311 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 ARHGEF4Q9NR80 690 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 TRHDEQ9UKU6 1024 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 PCDHB10Q9UN67 800 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 KCTD3Q9Y597 815 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 TNFRSF10CO14798 259 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 ASLP04424 464 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 APPP05067 770 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 PHKG2P15735 406 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 GBP1P32455 592 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 HTR3AP46098 478 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 GALK1P51570 392 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 ZYXQ15942 572 aaKnown RBP5.59□□□□□ -1.51
PTCD3-214ENST00000483925 MINDY4Q4G0A6 757 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 TRIM61Q5EBN2 209 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 CDCP2Q5VXM1 449 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 RNF111Q6ZNA4 994 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 NLRC3Q7RTR2 1065 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 TMEM151BQ8IW70 566 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 PHACTR4Q8IZ21 702 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 CNTD1Q8N815 330 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 PJA1Q8NG27 643 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 SYTL5Q8TDW5 730 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-214ENST00000483925 G6PC3Q9BUM1 346 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 RHOBTB2Q9BYZ6 727 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 TMX4Q9H1E5 349 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-214ENST00000483925 IFT22Q9H7X7 185 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 CNNM2Q9H8M5 875 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 JADE2Q9NQC1 790 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 LRP2BPQ9P2M1 347 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 TAGLN3Q9UI15 199 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 RCAN3Q9UKA8 241 aa5.59□□□□□ -1.51
PTCD3-214ENST00000483925 ZNF214Q9UL59 606 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-214ENST00000483925 ANO9A1A5B4 782 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 ANKRD34BA5PLL1 514 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 VSTM5A8MXK1 200 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 GABRDO14764 452 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 OPA1O60313 960 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 DNAJC8O75937 253 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-214ENST00000483925 ACRP10323 421 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 FGFR1P11362 822 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 COL6A1P12109 1028 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 PTMSP20962 102 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 RPL10P27635 214 aaKnown RBP5.58□□□□□ -1.52
PTCD3-214ENST00000483925 TRAPPC10P48553 1259 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 TMPRSS15P98073 1019 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 NMIQ13287 307 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-214ENST00000483925 ADGRF1Q5T601 910 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 OVOS1Q6IE37 1185 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 PKN3Q6P5Z2 889 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 LHFPL2Q6ZUX7 228 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 UBE2R2Q712K3 238 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-214ENST00000483925 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 SIRT2Q8IXJ6 389 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 OR2W6PQ8NHA6 318 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 KLHL6Q8WZ60 621 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 VWCEQ96DN2 955 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 DHRS1Q96LJ7 313 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 KCNC2Q96PR1 638 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 MENTQ9BUN1 341 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 IP6K2Q9UHH9 426 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 PNMA8BQ9ULN7 279 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-214ENST00000483925 APOBEC2Q9Y235 224 aaKnown RBP5.58□□□□□ -1.52
PTCD3-214ENST00000483925 SCINQ9Y6U3 715 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 ADAMTS20P59510 1910 aa5.58□□□□□ -1.52
PTCD3-214ENST00000483925 SLC22A31A6NKX4 558 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 NOTOA8MTQ0 251 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 RGS13O14921 159 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 PRPF3O43395 683 aaKnown RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 TCEA3O75764 348 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 MYL3P08590 195 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 CCND1P24385 295 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 KIR2DL1P43626 348 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 KIR2DL2P43627 348 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 SCNN1BP51168 640 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 PPP2R2AP63151 447 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 GABREP78334 506 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 SRSF3P84103 164 aaKnown RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 FAPQ12884 760 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 TCIRG1Q13488 830 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 SSPNQ14714 243 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 PCBP1Q15365 356 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 SLC14A2Q15849 920 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 RGL3Q3MIN7 710 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 IL31Q6EBC2 164 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 CCDC70Q6NSX1 233 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms