RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CSADQ9Y600 493 aa6.13□□□□□ -1.43
COL17A1-206ENST00000483876 CYP3A7-CYP3A51PA0A087WV96 503 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 A0A1W2PRG0 241 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 CLRN2A0PK11 232 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 FAM205CA6NFA0 338 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 SPDYE5A6NIY4 337 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 SMTNL1A8MU46 457 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 USP17L10C9JJH3 530 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 PIK3CDO00329 1044 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 IRF6O14896 467 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 IKBKBO14920 756 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 POLR2DO15514 142 aaKnown RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 SMC2O95347 1197 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 NDUFB10O96000 172 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 TPM3P06753 285 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 FDX1P10109 184 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 BCRP11274 1271 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 GCFC2P16383 781 aaKnown RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 ATP2B1P20020 1258 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 CYP3A7P24462 503 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 HOXA7P31268 230 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 MCM7P33993 719 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 TXLNAP40222 546 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 ATN1P54259 1190 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 JAG1P78504 1218 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 MAP3K9P80192 1104 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 ATP2B2Q01814 1243 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 AP3B2Q13367 1082 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 RRP1BQ14684 758 aaKnown RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 CCDC96Q2M329 555 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 TPRNQ4KMQ1 711 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 DCAF15Q66K64 600 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 FRMPD2Q68DX3 1309 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 TTBK2Q6IQ55 1244 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 SARM1Q6SZW1 724 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 WDFY4Q6ZS81 3184 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 ANKRD23Q86SG2 305 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 FAM160B2Q86V87 743 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 HOMER1Q86YM7 354 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 MLKLQ8NB16 471 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 PIBF1Q8WXW3 757 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 HERVK_113Q902F9 699 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 LPAR1Q92633 364 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 TRIM44Q96DX7 344 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 MFSD14AQ96MC6 490 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 GSDMAQ96QA5 445 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 GTPBP4Q9BZE4 634 aaKnown RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 SENP6Q9GZR1 1112 aaPredicted RBP6.12□□□□□ -1.43
COL17A1-206ENST00000483876 TMEM39BQ9GZU3 492 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 MAF1Q9H063 256 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 VCPKMTQ9H867 229 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 MAGEF1Q9HAY2 307 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 VEZTQ9HBM0 779 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 ZNF112Q9UJU3 913 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 FEM1BQ9UK73 627 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 ZBTB21Q9ULJ3 1066 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 COG5Q9UP83 839 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 KCNH4Q9UQ05 1017 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 PCDHA5Q9Y5H7 936 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 PCDHA1Q9Y5I3 950 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 C5orf42Q9H799 3197 aa6.12□□□□□ -1.43
COL17A1-206ENST00000483876 BAZ2BQ9UIF8 2168 aaKnown RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 SIPA1L1O43166 1804 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 VWA3AA6NCI4 1184 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 FAM196BA6NMK8 535 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 BECN2A8MW95 431 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 TMEM232C9JQI7 657 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 GOLGA6L19H0YKK7 550 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 ADAMTS3O15072 1205 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 TBX3O15119 743 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 ACTN4O43707 911 aaKnown RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 CCNT1O60563 726 aaKnown RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 PPP1R11O60927 126 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 GDF11O95390 407 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 ADCY5O95622 1261 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 OR52Z1P0C646 297 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 FXR2P51116 673 aaKnown RBP eCLIP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 STAT2P52630 851 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 GRIN1Q05586 938 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 TRIM32Q13049 653 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 DHX8Q14562 1220 aaKnown RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 POSTNQ15063 836 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 E2F4Q16254 413 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 IL17AQ16552 155 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 INF2Q27J81 1249 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 QRICH1Q2TAL8 776 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 SYDE2Q5VT97 1194 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 KCTD1Q719H9 257 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 FBXO11Q86XK2 927 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 CLEC10AQ8IUN9 316 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 GJD3Q8N144 294 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 KCTD17Q8N5Z5 321 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 TBCKQ8TEA7 893 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 CRYGNQ8WXF5 182 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 ZKSCAN4Q969J2 545 aaPredicted RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 COA7Q96BR5 231 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 PAGE5Q96GU1 130 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 EPSTI1Q96J88 318 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms