RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 DCTPP1Q9H773 170 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 MUTYHQ9UIF7 546 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 TECTAO75443 2155 aa12.77□□□□□ -0.37
SMARCC1-205ENST00000483847 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 RSPH10B2B2RC85 870 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 SORBS3O60504 671 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 UPP2O95045 317 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 SNHG28P0DPA3 235 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 THPOP40225 353 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 PLEKHG4Q58EX7 1191 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 RPAINQ86UA6 219 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 FBXO11Q86XK2 927 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 PRSS33Q8NF86 280 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 EMID1Q96A84 441 aaPredicted RBP12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 SAMD11Q96NU1 681 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 YME1L1Q96TA2 773 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 RMDN3Q96TC7 470 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 NSUN3Q9H649 340 aaKnown RBP12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 TCP11L1Q9NUJ3 509 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 FAM50BQ9Y247 325 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 EMSYQ7Z589 1322 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 CFAP54Q96N23 3096 aa12.76□□□□□ -0.37
SMARCC1-205ENST00000483847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 COL4A6Q14031 1691 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 STXBP2Q15833 593 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 RALGAPA2Q2PPJ7 1873 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 IER5LQ5T953 404 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 SERINC5Q86VE9 423 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 DHX37Q8IY37 1157 aaKnown RBP12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 PPTC7Q8NI37 304 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 NSUN6Q8TEA1 469 aaKnown RBP12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 TOP1MTQ969P6 601 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 MFSD14AQ96MC6 490 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 KATNAL1Q9BW62 490 aa12.75□□□□□ -0.37
SMARCC1-205ENST00000483847 ZFHX2Q9C0A1 2572 aaPredicted RBP12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 HOXD8P13378 290 aaPredicted RBP12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 EIF2AK2P19525 551 aaKnown RBP12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 LAMC2Q13753 1193 aa12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 SMAD2Q15796 467 aaKnown RBP12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 CTC1Q2NKJ3 1217 aa12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 HSDL1Q3SXM5 330 aa12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 RNF135Q8IUD6 432 aa12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 IWS1Q96ST2 819 aa12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 MRVI1Q9Y6F6 885 aa12.74□□□□□ -0.37
SMARCC1-205ENST00000483847 ABCB11O95342 1321 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 GRM6O15303 877 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 LINC01565O15544 149 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 MBTPS2O43462 519 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 TBX10O75333 385 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 EIF3JO75822 258 aaKnown RBP12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 RGS20O76081 388 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 FGAP02671 866 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 CTSHP09668 335 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 GTF2F1P35269 517 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 HAND2P61296 217 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 HYAL1Q12794 435 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 ALX1Q15699 326 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 IFIH1Q9BYX4 1025 aaKnown RBP12.73□□□□□ -0.37
SMARCC1-205ENST00000483847 TREHO43280 583 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 PPFIA4O75335 1185 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 CSPG5O95196 566 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 NR3C2P08235 984 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 LINC00271P0C7V0 271 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 CTNNB1P35222 781 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 GPATCH4Q5T3I0 446 aaKnown RBP12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 ARHGEF16Q5VV41 709 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 MIER1Q8N108 512 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 SEPT8Q92599 483 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 EDAQ92838 391 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 ATP6V0A1Q93050 837 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 TTC14Q96N46 770 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 C16orf70Q9BSU1 422 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
SMARCC1-205ENST00000483847 MYH6P13533 1939 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 OPLAHO14841 1288 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 GGPS1O95749 300 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 HOXC8P31273 242 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 SP2Q02086 613 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 QRICH1Q2TAL8 776 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 MCF2L2Q86YR7 1114 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 TBC1D10CQ8IV04 446 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 FAM227BQ96M60 508 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 SPATA33Q96N06 139 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 MAF1Q9H063 256 aa12.71□□□□□ -0.37
SMARCC1-205ENST00000483847 BCAS3Q9H6U6 928 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms