RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 KATNAL1Q9BW62 490 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 AGXT2Q9BYV1 514 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 GLT8D2Q9H1C3 349 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 MLXIPQ9HAP2 919 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 ZSWIM6Q9HCJ5 1215 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 FAM217BQ9NTX9 383 aaPredicted RBP15.94■□□□□ 0.14
VARS-225ENST00000482996 TRMT13Q9NUP7 481 aaKnown RBP15.94■□□□□ 0.14
VARS-225ENST00000482996 RTEL1Q9NZ71 1219 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 SCN10AQ9Y5Y9 1956 aa15.94■□□□□ 0.14
VARS-225ENST00000482996 SZT2Q5T011 3432 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 FIBPO43427 364 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 EIF5BO60841 1220 aaKnown RBP15.93■□□□□ 0.14
VARS-225ENST00000482996 PPFIA4O75335 1185 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 ICAM3P32942 547 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 CYP2C18P33260 490 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 AKAP17AQ02040 695 aaKnown RBP15.93■□□□□ 0.14
VARS-225ENST00000482996 NEDD9Q14511 834 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 RNPC3Q96LT9 517 aaKnown RBP15.93■□□□□ 0.14
VARS-225ENST00000482996 NOC4LQ9BVI4 516 aaKnown RBP15.93■□□□□ 0.14
VARS-225ENST00000482996 TM6SF1Q9BZW5 370 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 NOD1Q9Y239 953 aa15.93■□□□□ 0.14
VARS-225ENST00000482996 NID2Q14112 1375 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 SPATA31C2B4DYI2 1134 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 SORBS3O60504 671 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 CSF2RAP15509 400 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 ADCY7P51828 1080 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 EPHB4P54760 987 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 SP2Q02086 613 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 CDHR1Q96JP9 859 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 RIC8AQ9NPQ8 531 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 BARHL2Q9NY43 387 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 PCDHA6Q9UN73 950 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 PCDHA8Q9Y5H6 950 aa15.92■□□□□ 0.14
VARS-225ENST00000482996 SMCO2A6NFE2 343 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 STXBP3O00186 592 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 NOP56O00567 594 aaKnown RBP15.91■□□□□ 0.14
VARS-225ENST00000482996 FOSP01100 380 aaPredicted RBP15.91■□□□□ 0.14
VARS-225ENST00000482996 CYP2C9P11712 490 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 HOXD8P13378 290 aaPredicted RBP15.91■□□□□ 0.14
VARS-225ENST00000482996 PSEN2P49810 448 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 PFKFB3Q16875 520 aaPredicted RBP15.91■□□□□ 0.14
VARS-225ENST00000482996 HSDL1Q3SXM5 330 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 PSRC1Q6PGN9 363 aaPredicted RBP15.91■□□□□ 0.14
VARS-225ENST00000482996 METTL7BQ6UX53 244 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 GIMAP8Q8ND71 665 aaPredicted RBP15.91■□□□□ 0.14
VARS-225ENST00000482996 KAT2BQ92831 832 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 GPRASP2Q96D09 838 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 SENP7Q9BQF6 1050 aa15.91■□□□□ 0.14
VARS-225ENST00000482996 LAMA2P24043 3122 aaKnown RBP15.9■□□□□ 0.14
VARS-225ENST00000482996 MYH7BA7E2Y1 1941 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 F2P00734 622 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 ZNF286BP0CG31 522 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 SCG2P13521 617 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 PDIA3P30101 505 aaKnown RBP15.9■□□□□ 0.14
VARS-225ENST00000482996 CCL23P55773 120 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 EVCP57679 992 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 SEMA3FQ13275 785 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 MFSD10Q14728 455 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 TYW1BQ6NUM6 668 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 CYFIP1Q7L576 1253 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 C7orf31Q8N865 590 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 CCDC12Q8WUD4 166 aaPredicted RBP15.9■□□□□ 0.14
VARS-225ENST00000482996 PPP1R13LQ8WUF5 828 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.9■□□□□ 0.146e-6■■□□□ 12.7
VARS-225ENST00000482996 ALG1Q9BT22 464 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 UPF3BQ9BZI7 483 aaKnown RBP15.9■□□□□ 0.14
VARS-225ENST00000482996 IL23AQ9NPF7 189 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 UMODL1Q5DID0 1318 aa15.9■□□□□ 0.14
VARS-225ENST00000482996 PRPF3O43395 683 aaKnown RBP15.89■□□□□ 0.13
VARS-225ENST00000482996 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 BFSP2Q13515 415 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 TOB2Q14106 344 aaPredicted RBP15.89■□□□□ 0.13
VARS-225ENST00000482996 PTGISQ16647 500 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 KIAA0753Q2KHM9 967 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 TMEM240Q5SV17 173 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 RPUSD2Q8IZ73 545 aaKnown RBP15.89■□□□□ 0.13
VARS-225ENST00000482996 CCDC155Q8N6L0 562 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 RETREG2Q8NC44 543 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 MTIF3Q9H2K0 278 aaKnown RBP15.89■□□□□ 0.13
VARS-225ENST00000482996 PDRG1Q9NUG6 133 aa15.89■□□□□ 0.13
VARS-225ENST00000482996 HAS3O00219 553 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 MAFGO15525 162 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 ACRP10323 421 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 IFNAR1P17181 557 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 ANAPC15P60006 121 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 CCT2P78371 535 aaKnown RBP15.88■□□□□ 0.13
VARS-225ENST00000482996 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
VARS-225ENST00000482996 MTMR1Q13613 665 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 GDF6Q6KF10 455 aaPredicted RBP15.88■□□□□ 0.13
VARS-225ENST00000482996 ZNF365Q70YC5 407 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 DEFB123Q8N688 67 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 PHKBQ93100 1093 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 ZNF274Q96GC6 653 aaPredicted RBP15.88■□□□□ 0.13
VARS-225ENST00000482996 SLC26A6Q9BXS9 759 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 RNF26Q9BY78 433 aaPredicted RBP15.88■□□□□ 0.13
VARS-225ENST00000482996 ANO3Q9BYT9 981 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 WNT8AQ9H1J5 351 aa15.88■□□□□ 0.13
VARS-225ENST00000482996 C6orf50Q9HD87 102 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms