RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 C2CD5Q86YS7 1000 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 SH3RF3Q8TEJ3 882 aaPredicted RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 AK8Q96MA6 479 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 MMTAG2Q9BU76 263 aaKnown RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 SEC24CP53992 1094 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 TBC1D9BQ66K14 1250 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 SPATS2Q86XZ4 545 aaKnown RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 PARP9Q8IXQ6 854 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 CCDC47Q96A33 483 aaKnown RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 MAGEF1Q9HAY2 307 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 FAM207AQ9NSI2 230 aaPredicted RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 CPSF2Q9P2I0 782 aaKnown RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
CCDC78-213ENST00000482878 RTCBQ9Y3I0 505 aaKnown RBP13.69□□□□□ -0.22
CCDC78-213ENST00000482878 E7EVH7 732 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 MOCS3O95396 460 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 SMTNP53814 917 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 ARMC2Q8NEN0 867 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 LRRC1Q9BTT6 524 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 ZMYND12Q9H0C1 365 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 DMGDHQ9UI17 866 aaKnown RBP13.68□□□□□ -0.22
CCDC78-213ENST00000482878 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 PCDHA13Q9Y5I0 950 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 LAMB2P55268 1798 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 SSR1P43307 286 aaKnown RBP13.68□□□□□ -0.22
CCDC78-213ENST00000482878 NAPAP54920 295 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 NAA35Q5VZE5 725 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 TRIM58Q8NG06 486 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
CCDC78-213ENST00000482878 SPDL1Q96EA4 605 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 PSMB7Q99436 277 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 TSGA10Q9BZW7 698 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 SH2D4AQ9H788 454 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 PPANQ9NQ55 473 aaKnown RBP13.68□□□□□ -0.22
CCDC78-213ENST00000482878 SMARCAL1Q9NZC9 954 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 USP21Q9UK80 565 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 SIK3Q9Y2K2 1263 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 RREB1Q92766 1687 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 KIAA1551Q9HCM1 1747 aa13.68□□□□□ -0.22
CCDC78-213ENST00000482878 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 FNBP4Q8N3X1 1017 aaPredicted RBP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 HNRNPH3P31942 346 aaKnown RBP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 CXCR5P32302 372 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 EIF4A3P38919 411 aaKnown RBP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 KIF11P52732 1056 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 SLC7A5Q01650 507 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 DIXDC1Q155Q3 683 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 VWA3BQ502W6 1294 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 ZNF473Q8WTR7 871 aaKnown RBP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 HAUS2Q9NVX0 235 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 ENO4A6NNW6 628 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 NNTQ13423 1086 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 NONOQ15233 471 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 GRIK5Q16478 980 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 CENPPQ6IPU0 288 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 NFRKBQ6P4R8 1299 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 ZNF444Q8N0Y2 327 aaPredicted RBP13.67□□□□□ -0.22
CCDC78-213ENST00000482878 MMGT1Q8N4V1 131 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 SPATA4Q8NEY3 305 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 NDST4Q9H3R1 872 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 BAIAP2L1Q9UHR4 511 aa13.67□□□□□ -0.22
CCDC78-213ENST00000482878 USO1O60763 962 aaKnown RBP13.66□□□□□ -0.22
CCDC78-213ENST00000482878 TACC1O75410 805 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-213ENST00000482878 EIF6P56537 245 aaKnown RBP13.66□□□□□ -0.22
CCDC78-213ENST00000482878 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
CCDC78-213ENST00000482878 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 IQCEQ6IPM2 695 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 MMRN2Q9H8L6 949 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 SALL4Q9UJQ4 1053 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 LSP1P33241 339 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 APBA1Q02410 837 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 PICALMQ13492 652 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 CYB5D1Q6P9G0 228 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 KRT25Q7Z3Z0 450 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 NEK8Q86SG6 692 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 AMPD3Q01432 767 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 ANKRD13CQ8N6S4 541 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 OSBPL9Q96SU4 736 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 BLOC1S4Q9NUP1 217 aa13.66□□□□□ -0.22
CCDC78-213ENST00000482878 MYMKA6NI61 221 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 LRRC53A6NM62 1247 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 NCK2O43639 380 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms