RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ACTN1P12814 892 aa22.86■■□□□ 1.25
MSH5-215ENST00000482280 UBA1P22314 1058 aaKnown RBP22.86■■□□□ 1.25
MSH5-215ENST00000482280 PSEN2P49810 448 aa22.86■■□□□ 1.25
MSH5-215ENST00000482280 COL9A3Q14050 684 aaPredicted RBP22.86■■□□□ 1.25
MSH5-215ENST00000482280 MFSD10Q14728 455 aa22.86■■□□□ 1.25
MSH5-215ENST00000482280 PCNX4Q63HM2 1172 aa22.86■■□□□ 1.25
MSH5-215ENST00000482280 PPP1R13LQ8WUF5 828 aa22.86■■□□□ 1.25
MSH5-215ENST00000482280 FRMPD4Q14CM0 1322 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 TMEM265A0A087WTH1 108 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 PITPNM1O00562 1244 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 MEIS2O14770 477 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 RGS20O76081 388 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 ZNF286BP0CG31 522 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 HSPA4P34932 840 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 RFC2P35250 354 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 RCAN1P53805 252 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 NAPAP54920 295 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 KIAA0753Q2KHM9 967 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 SESTD1Q86VW0 696 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 GIMAP8Q8ND71 665 aaPredicted RBP22.85■■□□□ 1.25
MSH5-215ENST00000482280 SCLYQ96I15 445 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 CDHR1Q96JP9 859 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 INPP4AQ96PE3 977 aaPredicted RBP22.85■■□□□ 1.25
MSH5-215ENST00000482280 WNT8AQ9H1J5 351 aa22.85■■□□□ 1.25
MSH5-215ENST00000482280 BAZ2BQ9UIF8 2168 aaKnown RBP22.84■■□□□ 1.25
MSH5-215ENST00000482280 KIAA1217Q5T5P2 1943 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 ZBBXA8MT70 800 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 F2P00734 622 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 METAP2P50579 478 aaKnown RBP eCLIP22.84■■□□□ 1.25
MSH5-215ENST00000482280 C16orf59Q7L2K0 433 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 OTOP2Q7RTS6 562 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 CAGE1Q8TC20 777 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 HERVK_113Q902F9 699 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 BRPF3Q9ULD4 1205 aa22.84■■□□□ 1.25
MSH5-215ENST00000482280 SPATA31C2B4DYI2 1134 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 hCG_1984214I3L0E3 225 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 DNAJB2P25686 324 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 ICAM3P32942 547 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 MRPS9P82933 396 aaKnown RBP22.83■■□□□ 1.25
MSH5-215ENST00000482280 HSDL1Q3SXM5 330 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 PPP1R18Q6NYC8 613 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 METTL7BQ6UX53 244 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 Q6ZUG5 572 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 DEFB128Q7Z7B8 93 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 ZNF713Q8N859 430 aaPredicted RBP22.83■■□□□ 1.25
MSH5-215ENST00000482280 KAT2BQ92831 832 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 GPKOWQ92917 476 aaPredicted RBP eCLIP22.83■■□□□ 1.254e-8■■■■□ 19.5
MSH5-215ENST00000482280 FTOQ9C0B1 505 aaKnown RBP eCLIP22.83■■□□□ 1.25
MSH5-215ENST00000482280 GLT8D2Q9H1C3 349 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 SEMA6BQ9H3T3 888 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 PPP4R2Q9NY27 417 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 MSRAQ9UJ68 235 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 SNX14Q9Y5W7 946 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 SLC4A7Q9Y6M7 1214 aa22.83■■□□□ 1.25
MSH5-215ENST00000482280 V9GY48 417 aaPredicted RBP22.83■■□□□ 1.25
MSH5-215ENST00000482280 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
MSH5-215ENST00000482280 SP2Q02086 613 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 RAB30Q15771 203 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 GDF6Q6KF10 455 aaPredicted RBP22.82■■□□□ 1.24
MSH5-215ENST00000482280 CYFIP1Q7L576 1253 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 TEX2Q8IWB9 1127 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 TIFAQ96CG3 184 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 HDAC6Q9UBN7 1215 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 GTF2IRD1Q9UHL9 959 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 CNTNAP5Q8WYK1 1306 aa22.82■■□□□ 1.24
MSH5-215ENST00000482280 ADCY7P51828 1080 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 AKAP17AQ02040 695 aaKnown RBP22.81■■□□□ 1.24
MSH5-215ENST00000482280 UBE2SQ16763 222 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 ERICH6BQ5W0A0 696 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 SLC17A8Q8NDX2 589 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 AFAP1L1Q8TED9 768 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 BRF1Q92994 677 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 USP26Q9BXU7 913 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 ZNF215Q9UL58 517 aaPredicted RBP22.81■■□□□ 1.24
MSH5-215ENST00000482280 PCDHA6Q9UN73 950 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 PCDHA8Q9Y5H6 950 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 SCN10AQ9Y5Y9 1956 aa22.81■■□□□ 1.24
MSH5-215ENST00000482280 H3BRB1 525 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 EPB41L2O43491 1005 aaKnown RBP22.8■■□□□ 1.24
MSH5-215ENST00000482280 PARNO95453 639 aaKnown RBP22.8■■□□□ 1.24
MSH5-215ENST00000482280 IQCF3P0C7M6 154 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 HOXD8P13378 290 aaPredicted RBP22.8■■□□□ 1.24
MSH5-215ENST00000482280 SP4Q02446 784 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 APOBRQ0VD83 1088 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 WWC2Q6AWC2 1192 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 KCNB2Q92953 911 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 GPRASP2Q96D09 838 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 SENP7Q9BQF6 1050 aa22.8■■□□□ 1.24
MSH5-215ENST00000482280 TUT1Q9H6E5 874 aaKnown RBP22.8■■□□□ 1.24
MSH5-215ENST00000482280 FOSP01100 380 aaPredicted RBP22.79■■□□□ 1.24
MSH5-215ENST00000482280 CPA1P15085 419 aa22.79■■□□□ 1.24
MSH5-215ENST00000482280 RPS6KB1P23443 525 aa22.79■■□□□ 1.24
MSH5-215ENST00000482280 MTMR1Q13613 665 aa22.79■■□□□ 1.24
MSH5-215ENST00000482280 RASIP1Q5U651 963 aa22.79■■□□□ 1.24
MSH5-215ENST00000482280 CCDC12Q8WUD4 166 aaPredicted RBP22.79■■□□□ 1.24
MSH5-215ENST00000482280 GUCD1Q96NT3 240 aa22.79■■□□□ 1.24
MSH5-215ENST00000482280 CDX2Q99626 313 aaPredicted RBP22.79■■□□□ 1.24
MSH5-215ENST00000482280 LAMA3Q16787 3333 aa22.79■■□□□ 1.24
MSH5-215ENST00000482280 HAS3O00219 553 aa22.78■■□□□ 1.24
MSH5-215ENST00000482280 LGALS2P05162 132 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms