RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 TCP11L1Q9NUJ3 509 aa12.07□□□□□ -0.48
DDX39B-220ENST00000482195 COG5Q9UP83 839 aa12.07□□□□□ -0.48
DDX39B-220ENST00000482195 NEDD4P46934 1319 aa12.07□□□□□ -0.48
DDX39B-220ENST00000482195 CCDC171Q6TFL3 1326 aa12.07□□□□□ -0.48
DDX39B-220ENST00000482195 LCHNA4D1U4 455 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 FGRP09769 529 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 SELPP16109 830 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 WDR5P61964 334 aaKnown RBP12.06□□□□□ -0.48
DDX39B-220ENST00000482195 PTGDRQ13258 359 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 LY6KQ17RY6 165 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 GPATCH4Q5T3I0 446 aaKnown RBP12.06□□□□□ -0.48
DDX39B-220ENST00000482195 GDF6Q6KF10 455 aaPredicted RBP12.06□□□□□ -0.48
DDX39B-220ENST00000482195 FAM117BQ6P1L5 589 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 LRRC8DQ7L1W4 858 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 RILPL2Q969X0 211 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
DDX39B-220ENST00000482195 METRNQ9UJH8 293 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 ABCB11O95342 1321 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 ZMYM6O95789 1325 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 SALL3Q9BXA9 1300 aa12.06□□□□□ -0.48
DDX39B-220ENST00000482195 ZNF286BP0CG31 522 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
DDX39B-220ENST00000482195 CASTP20810 708 aaKnown RBP12.05□□□□□ -0.48
DDX39B-220ENST00000482195 PDE1AP54750 535 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 DEFB103AP81534 67 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 ARHGEF16Q5VV41 709 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 C7orf31Q8N865 590 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 NSUN6Q8TEA1 469 aaKnown RBP12.05□□□□□ -0.48
DDX39B-220ENST00000482195 ESR2Q92731 530 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 TAAR1Q96RJ0 339 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 KAT14Q9H8E8 782 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 HCN4Q9Y3Q4 1203 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 NLRC5Q86WI3 1866 aa12.05□□□□□ -0.48
DDX39B-220ENST00000482195 DOCK5Q9H7D0 1870 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 SORBS3O60504 671 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 SNHG28P0DPA3 235 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-220ENST00000482195 MFAP1P55081 439 aaKnown RBP12.04□□□□□ -0.48
DDX39B-220ENST00000482195 ARHGAP1Q07960 439 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 STXBP2Q15833 593 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 DGKDQ16760 1214 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 CNKSR3Q6P9H4 555 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 PNMA1Q8ND90 353 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 SYTL5Q8TDW5 730 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-220ENST00000482195 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
DDX39B-220ENST00000482195 TTC14Q96N46 770 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 RMDN3Q96TC7 470 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 KATNAL1Q9BW62 490 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 MRVI1Q9Y6F6 885 aa12.04□□□□□ -0.48
DDX39B-220ENST00000482195 KDM4AO75164 1064 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
DDX39B-220ENST00000482195 CKBP12277 381 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 PSEN2P49810 448 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 FBXO11Q86XK2 927 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 MCF2L2Q86YR7 1114 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 DHX37Q8IY37 1157 aaKnown RBP12.03□□□□□ -0.48
DDX39B-220ENST00000482195 ADGRF4Q8IZF3 695 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 TBC1D5Q92609 795 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 KAT2BQ92831 832 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 EPHX3Q9H6B9 360 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 VAT1LQ9HCJ6 419 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 HDAC6Q9UBN7 1215 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 GTF2IRD1Q9UHL9 959 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 MRPL11Q9Y3B7 192 aaKnown RBP12.03□□□□□ -0.48
DDX39B-220ENST00000482195 KAT6AQ92794 2004 aa12.03□□□□□ -0.48
DDX39B-220ENST00000482195 BAZ2BQ9UIF8 2168 aaKnown RBP12.02□□□□□ -0.48
DDX39B-220ENST00000482195 FAM86C2PA6NEL3 165 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 RBAK-RBAKDNI3L0D1 243 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 ZNF213O14771 459 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 LPXNO60711 386 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 NBNO60934 754 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 CFBP00751 764 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 PARP1P09874 1014 aaKnown RBP12.02□□□□□ -0.49
DDX39B-220ENST00000482195 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
DDX39B-220ENST00000482195 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 QRICH1Q2TAL8 776 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 ASPRV1Q53RT3 343 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 CCDC178Q5BJE1 867 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 TMEM31Q5JXX7 168 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 SESTD1Q86VW0 696 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 PARP9Q8IXQ6 854 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 RGS22Q8NE09 1264 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 TGS1Q96RS0 853 aaKnown RBP12.02□□□□□ -0.49
DDX39B-220ENST00000482195 CTAGE1Q96RT6 745 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 LNPKQ9C0E8 428 aa12.02□□□□□ -0.49
DDX39B-220ENST00000482195 B4E1Z4 1266 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 GJB5O95377 273 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
DDX39B-220ENST00000482195 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
DDX39B-220ENST00000482195 IKBKEQ14164 716 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 TCTN1Q2MV58 587 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 MYOCDQ8IZQ8 938 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 IWS1Q96ST2 819 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 RAD9AQ99638 391 aa12.01□□□□□ -0.49
DDX39B-220ENST00000482195 LRFN3Q9BTN0 628 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms