RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ASB14A6NK59 587 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 ADAM9Q13443 819 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 PAF1Q8N7H5 531 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 ENOX1Q8TC92 643 aaKnown RBP21.25■□□□□ 0.99
CCM2-214ENST00000481194 CEP170P1Q96L14 293 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 XPO4Q9C0E2 1151 aaKnown RBP21.25■□□□□ 0.99
CCM2-214ENST00000481194 PARVGQ9HBI0 331 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 TMEM260Q9NX78 707 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 DOT1LQ8TEK3 1739 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 PALM3A6NDB9 673 aaPredicted RBP21.25■□□□□ 0.99
CCM2-214ENST00000481194 FCER1AP12319 257 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 TTBK2Q6IQ55 1244 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 EPSTI1Q96J88 318 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 RASSF7Q02833 373 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 ARMCX5Q6P1M9 558 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 MCM6Q14566 821 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 ANKS1AQ92625 1134 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 CHAMP1Q96JM3 812 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 ZNF830Q96NB3 372 aaPredicted RBP21.24■□□□□ 0.99
CCM2-214ENST00000481194 NPM3O75607 178 aaKnown RBP21.24■□□□□ 0.99
CCM2-214ENST00000481194 SLC25A27O95847 323 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 TUBB2AQ13885 445 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 LONRF3Q496Y0 759 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 TUBB2BQ9BVA1 445 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 JMJD4Q9H9V9 463 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 KRT5P13647 590 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 NFIAQ12857 509 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 GBP6Q6ZN66 633 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 THAP9Q9H5L6 903 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCM2-214ENST00000481194 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 PVALEFA0A1B0GWK0 134 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 DDIT3P35638 169 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 SFMBT2Q5VUG0 894 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 UNC13DQ70J99 1090 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 RAD54LQ92698 747 aa21.24■□□□□ 0.99
CCM2-214ENST00000481194 PLCH1Q4KWH8 1693 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 CEP112Q8N8E3 955 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 TCP11Q8WWU5 503 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 PFASO15067 1338 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 CTNNA2P26232 953 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 CYP2J2P51589 502 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 SLC8A3P57103 927 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 LRRC63Q05C16 580 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 CHST13Q8NET6 341 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 PARK7Q99497 189 aaKnown RBP21.23■□□□□ 0.99
CCM2-214ENST00000481194 IL17RAQ96F46 866 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 FAM81BQ96LP2 452 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 KMT5AQ9NQR1 393 aa21.23■□□□□ 0.99
CCM2-214ENST00000481194 CTDNEP1O95476 244 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 CETPP11597 493 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 CCNE1P24864 410 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 FMR1NBQ8N0W7 255 aaPredicted RBP21.22■□□□□ 0.99
CCM2-214ENST00000481194 CNGA1P29973 690 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 LRRIQ4A6NIV6 560 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 APOBEC3HQ6NTF7 200 aaKnown RBP21.22■□□□□ 0.99
CCM2-214ENST00000481194 POTEDQ86YR6 584 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 FANCLQ9NW38 375 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 ZHX1Q9UKY1 873 aaPredicted RBP21.22■□□□□ 0.99
CCM2-214ENST00000481194 KRT9P35527 623 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 LIN9Q5TKA1 542 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 NOX5Q96PH1 765 aa21.22■□□□□ 0.99
CCM2-214ENST00000481194 PDXDC2PQ6P474 469 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 MCPH1Q8NEM0 835 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 PSMC2P35998 433 aaKnown RBP21.21■□□□□ 0.99
CCM2-214ENST00000481194 TTLL4Q14679 1199 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 TMX2Q9Y320 296 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 TNNC2P02585 160 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 P4HBP07237 508 aaKnown RBP21.21■□□□□ 0.99
CCM2-214ENST00000481194 FDPSP14324 419 aaKnown RBP21.21■□□□□ 0.99
CCM2-214ENST00000481194 EPHX2P34913 555 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 FKBP3Q00688 224 aaKnown RBP21.21■□□□□ 0.99
CCM2-214ENST00000481194 SUGCTQ9HAC7 445 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 TUFT1Q9NNX1 390 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 TMCO3Q6UWJ1 677 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 BPIFA3Q9BQP9 254 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 SENP2Q9HC62 589 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 DNAI1Q9UI46 699 aa21.21■□□□□ 0.99
CCM2-214ENST00000481194 COPB1P53618 953 aaKnown RBP21.2■□□□□ 0.99
CCM2-214ENST00000481194 TNNI1P19237 187 aa21.2■□□□□ 0.98
CCM2-214ENST00000481194 KMT5BQ4FZB7 885 aa21.2■□□□□ 0.98
CCM2-214ENST00000481194 MKRN3Q13064 507 aaKnown RBP21.2■□□□□ 0.98
CCM2-214ENST00000481194 CNOT6LQ96LI5 555 aaKnown RBP21.2■□□□□ 0.98
CCM2-214ENST00000481194 LSM14BQ9BX40 385 aaKnown RBP21.2■□□□□ 0.98
CCM2-214ENST00000481194 YARSP54577 528 aaKnown RBP21.2■□□□□ 0.98
CCM2-214ENST00000481194 CEP55Q53EZ4 464 aa21.2■□□□□ 0.98
CCM2-214ENST00000481194 GINS2Q9Y248 185 aa21.2■□□□□ 0.98
CCM2-214ENST00000481194 EPHA7Q15375 998 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 DPCR1Q3MIW9 517 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 DDX12PQ92771 950 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 SEL1LQ9UBV2 794 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 FBXO2Q9UK22 296 aaPredicted RBP21.19■□□□□ 0.98
CCM2-214ENST00000481194 ATF7P17544 494 aaPredicted RBP21.19■□□□□ 0.98
CCM2-214ENST00000481194 TIPINQ9BVW5 301 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 CCSER1Q9C0I3 900 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 CTAGE15A4D2H0 777 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 PRPF6O94906 941 aaKnown RBP21.19■□□□□ 0.98
CCM2-214ENST00000481194 CTAGE8P0CG41 777 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 CTAGE6Q86UF2 777 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 CTAGE4Q8IX94 777 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms