RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ARHGEF38Q9NXL2 777 aa11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
PRPF4B-206ENST00000481109 GLI2P10070 1586 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 RIMS2Q9UQ26 1411 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 ARAP3Q8WWN8 1544 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 ANO9A1A5B4 782 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 MATN2O00339 956 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 IGF2BP3O00425 579 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 SKIP12755 728 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 POLR2EP19388 210 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 KCNA3P22001 575 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 SKIV2L2P42285 1042 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 TRIM71Q2Q1W2 868 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 CABP7Q86V35 215 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 TTC30BQ8N4P2 665 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 VPS37AQ8NEZ2 397 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 TIMMDC1Q9NPL8 285 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 EURLQ9NYK6 297 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 BTBD7Q9P203 1132 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 TUBE1Q9UJT0 475 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 PLEKHG1Q9ULL1 1385 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 ASXL2Q76L83 1435 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 ABCA9Q8IUA7 1624 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 TPBGLP0DKB5 382 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 GUCY2DQ02846 1103 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 LIN52Q52LA3 116 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 ZNF662Q6ZS27 426 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 ASRGL1Q7L266 308 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 TMTC1Q8IUR5 882 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 RAB3IPQ96QF0 476 aaPredicted RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 RPL26L1Q9UNX3 145 aaKnown RBP11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 AGAP1Q9UPQ3 857 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
PRPF4B-206ENST00000481109 MROH2AA6NES4 1674 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 VAMP4O75379 141 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 KRT16P08779 473 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 RAD23BP54727 409 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 OCRLQ01968 901 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 PLS1Q14651 629 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 FKBP15Q5T1M5 1219 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 ALDH16A1Q8IZ83 802 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 HPS3Q969F9 1004 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 ZNF333Q96JL9 665 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 CCDC42Q96M95 316 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 GBA3Q9H227 469 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 CNOT10Q9H9A5 744 aaKnown RBP11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 HEY1Q9Y5J3 304 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 NSD3Q9BZ95 1437 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
PRPF4B-206ENST00000481109 SPECC1L-ADORA2AF8WAN1 911 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 LCA5LO95447 670 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 A1BGP04217 495 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 PYGMP11217 842 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 BDNFP23560 247 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 TMOD1P28289 359 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 VAV2P52735 878 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 C14orf80Q86SX3 495 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 CLASRPQ8N2M8 674 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 NOC3LQ8WTT2 800 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■■ 56.2
PRPF4B-206ENST00000481109 APPBP2Q92624 585 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 HGH1Q9BTY7 390 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 C14orf93Q9H972 538 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 STIM2Q9P246 746 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 A0A0U1RQJ8 604 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 TRIM64CA6NLI5 447 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 CBFA2T3O75081 653 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 PABPC4LP0CB38 370 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 GNAT2P19087 354 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 S100A5P33763 92 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 CCNFP41002 786 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 PPP2R2AP63151 447 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 BNIP1Q12981 228 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 ITGA9Q13797 1035 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 LRP8Q14114 963 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 KIF22Q14807 665 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 CCDC129Q6ZRS4 1044 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 MAEAQ7L5Y9 396 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 NECAB1Q8N987 351 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 ACMSDQ8TDX5 336 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms