RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 FIBPO43427 364 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 GGPS1O95749 300 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 ASGR1P07306 291 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 UBA1P22314 1058 aaKnown RBP23.22■■□□□ 1.31
CTSA-206ENST00000480961 KRT40Q6A162 431 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 MCTP2Q6DN12 878 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 GALNT17Q6IS24 598 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 DHX37Q8IY37 1157 aaKnown RBP23.22■■□□□ 1.31
CTSA-206ENST00000480961 FAM184AQ8NB25 1140 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 AFG1LQ8WV93 481 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 MXRA8Q9BRK3 442 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 JADE2Q9NQC1 790 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 PHF24Q9UPV7 400 aa23.22■■□□□ 1.31
CTSA-206ENST00000480961 ATP9AO75110 1047 aa23.21■■□□□ 1.31
CTSA-206ENST00000480961 CST5P28325 142 aaPredicted RBP23.21■■□□□ 1.31
CTSA-206ENST00000480961 ICAM3P32942 547 aa23.21■■□□□ 1.31
CTSA-206ENST00000480961 NKX3-2P78367 333 aa23.21■■□□□ 1.31
CTSA-206ENST00000480961 HMGN5P82970 282 aaKnown RBP23.21■■□□□ 1.31
CTSA-206ENST00000480961 MTMR1Q13613 665 aa23.21■■□□□ 1.31
CTSA-206ENST00000480961 TRIM29Q14134 588 aa23.21■■□□□ 1.31
CTSA-206ENST00000480961 KCNV1Q6PIU1 500 aa23.21■■□□□ 1.31
CTSA-206ENST00000480961 CXCL17Q6UXB2 119 aa23.21■■□□□ 1.31
CTSA-206ENST00000480961 FAM177A1Q8N128 213 aaPredicted RBP23.21■■□□□ 1.31
CTSA-206ENST00000480961 TNRC18O15417 2968 aaPredicted RBP23.2■■□□□ 1.3
CTSA-206ENST00000480961 A0A1W2PQ45 241 aaPredicted RBP23.2■■□□□ 1.3
CTSA-206ENST00000480961 A0A1W2PQY0 241 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 FAM86B1E9PN63 330 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 EDIL3O43854 480 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 MYL3P08590 195 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 FAM86B2P0C5J1 330 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 ARP10275 920 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 TGFB3P10600 412 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 NR5A1Q13285 461 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 CEP55Q53EZ4 464 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 CELF3Q5SZQ8 465 aaKnown RBP23.2■■□□□ 1.3
CTSA-206ENST00000480961 PCSK9Q8NBP7 692 aaKnown RBP23.2■■□□□ 1.3
CTSA-206ENST00000480961 TBCKQ8TEA7 893 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 CRYGNQ8WXF5 182 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 VTI1AQ96AJ9 217 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 GPRASP2Q96D09 838 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 C8orf76Q96K31 380 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 TSEN34Q9BSV6 310 aaKnown RBP23.2■■□□□ 1.3
CTSA-206ENST00000480961 TELO2Q9Y4R8 837 aa23.2■■□□□ 1.3
CTSA-206ENST00000480961 CYP3A4P08684 503 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 KRT2P35908 639 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 CPT1AP50416 773 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 LAMC2Q13753 1193 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 LRRC26Q2I0M4 334 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 EARS2Q5JPH6 523 aaKnown RBP23.19■■□□□ 1.3
CTSA-206ENST00000480961 MYSM1Q5VVJ2 828 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 CYFIP1Q7L576 1253 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 DPF3Q92784 378 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 MLXIPQ9HAP2 919 aa23.19■■□□□ 1.3
CTSA-206ENST00000480961 FAM205CA6NFA0 338 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 MOXD2PA6NHM9 499 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 A6NJR5 290 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 BTBD18B2RXH4 712 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 MEIS1O00470 390 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 MMP1P03956 469 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 SP4Q02446 784 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 INF2Q27J81 1249 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 PIK3AP1Q6ZUJ8 805 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 KRT25Q7Z3Z0 450 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 SPATA33Q96N06 139 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 KCNH7Q9NS40 1196 aa23.18■■□□□ 1.3
CTSA-206ENST00000480961 CCDC194A0A1B0GVG4 234 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 ZEB2O60315 1214 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 MMP3P08254 477 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 KCNA2P16389 499 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 GJB2P29033 226 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 PSMC6P62333 389 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 NONOQ15233 471 aaKnown RBP eCLIP23.17■■□□□ 1.3
CTSA-206ENST00000480961 HSDL1Q3SXM5 330 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 SLC39A5Q6ZMH5 540 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 PLA2G4DQ86XP0 818 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 DIS3L2Q8IYB7 885 aaKnown RBP23.17■■□□□ 1.3
CTSA-206ENST00000480961 PPP1R13LQ8WUF5 828 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 HTATIP2Q9BUP3 242 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 BRMS1Q9HCU9 246 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 STARD7Q9NQZ5 370 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 SMC3Q9UQE7 1217 aa23.17■■□□□ 1.3
CTSA-206ENST00000480961 IGLV3-22A0A075B6J6 115 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 CHMP4BP1P59074 171 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 NEDD9Q14511 834 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 PRR16Q569H4 304 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 BRDTQ58F21 947 aaPredicted RBP23.16■■□□□ 1.3
CTSA-206ENST00000480961 EMID1Q96A84 441 aaPredicted RBP23.16■■□□□ 1.3
CTSA-206ENST00000480961 CDHR1Q96JP9 859 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 GLT1D1Q96MS3 346 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 AGO4Q9HCK5 861 aaKnown RBP23.16■■□□□ 1.3
CTSA-206ENST00000480961 FOXD4L1Q9NU39 408 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 FRMPD3Q5JV73 1810 aa23.16■■□□□ 1.3
CTSA-206ENST00000480961 TDP2O95551 362 aa23.15■■□□□ 1.3
CTSA-206ENST00000480961 CUL4AQ13619 759 aa23.15■■□□□ 1.3
CTSA-206ENST00000480961 FBXO18Q8NFZ0 1043 aa23.15■■□□□ 1.3
CTSA-206ENST00000480961 PPTC7Q8NI37 304 aa23.15■■□□□ 1.3
CTSA-206ENST00000480961 TNFRSF25Q93038 417 aa23.15■■□□□ 1.3
CTSA-206ENST00000480961 PCDH10Q9P2E7 1040 aa23.15■■□□□ 1.3
CTSA-206ENST00000480961 ATP11BQ9Y2G3 1177 aa23.15■■□□□ 1.3
CTSA-206ENST00000480961 K7ELQ4 463 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms