RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 TRMT13Q9NUP7 481 aaKnown RBP19.55■□□□□ 0.72
HSPG2-209ENST00000480900 V9GY48 417 aaPredicted RBP19.55■□□□□ 0.72
HSPG2-209ENST00000480900 MYO9BQ13459 2157 aa19.54■□□□□ 0.72
HSPG2-209ENST00000480900 SCN5AQ14524 2016 aa19.54■□□□□ 0.72
HSPG2-209ENST00000480900 GGPS1O95749 300 aa19.54■□□□□ 0.72
HSPG2-209ENST00000480900 CYP2C18P33260 490 aa19.54■□□□□ 0.72
HSPG2-209ENST00000480900 SP2Q02086 613 aa19.54■□□□□ 0.72
HSPG2-209ENST00000480900 FAM47CQ5HY64 1035 aa19.54■□□□□ 0.72
HSPG2-209ENST00000480900 KAT2BQ92831 832 aa19.54■□□□□ 0.72
HSPG2-209ENST00000480900 ZFP91Q96JP5 570 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-209ENST00000480900 SPATA31C2B4DYI2 1134 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 FIBPO43427 364 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 CSF2RAP15509 400 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 NAPAP54920 295 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 UBE2SQ16763 222 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 RUFY3Q7L099 469 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 SESTD1Q86VW0 696 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 RNPC3Q96LT9 517 aaKnown RBP19.53■□□□□ 0.72
HSPG2-209ENST00000480900 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 KATNAL1Q9BW62 490 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 ZSWIM6Q9HCJ5 1215 aa19.53■□□□□ 0.72
HSPG2-209ENST00000480900 UMODL1Q5DID0 1318 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 SPDYE3A6NKU9 549 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 STXBP3O00186 592 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 PPFIA4O75335 1185 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 F2P00734 622 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 ADD1P35611 737 aaKnown RBP19.52■□□□□ 0.72
HSPG2-209ENST00000480900 EVCP57679 992 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 NEDD9Q14511 834 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 TYW1BQ6NUM6 668 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 EHMT1Q9H9B1 1298 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 MLXIPQ9HAP2 919 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 RIC8AQ9NPQ8 531 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 BARHL2Q9NY43 387 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 RTEL1Q9NZ71 1219 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 TET1Q8NFU7 2136 aa19.52■□□□□ 0.72
HSPG2-209ENST00000480900 CYP2C9P11712 490 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 ADCY7P51828 1080 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 HSDL1Q3SXM5 330 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 PSRC1Q6PGN9 363 aaPredicted RBP19.51■□□□□ 0.71
HSPG2-209ENST00000480900 NLRX1Q86UT6 975 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.71
HSPG2-209ENST00000480900 GLT8D2Q9H1C3 349 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 WNT8AQ9H1J5 351 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 IL23AQ9NPF7 189 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 CYP46A1Q9Y6A2 500 aa19.51■□□□□ 0.71
HSPG2-209ENST00000480900 HAS3O00219 553 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 SORBS3O60504 671 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 FOSP01100 380 aaPredicted RBP19.5■□□□□ 0.71
HSPG2-209ENST00000480900 ZNF286BP0CG31 522 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 PSEN2P49810 448 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 CHMP4BP1P59074 171 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 SMAD3P84022 425 aaKnown RBP19.5■□□□□ 0.71
HSPG2-209ENST00000480900 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
HSPG2-209ENST00000480900 TMEM240Q5SV17 173 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 FAM109BQ6ICB4 259 aaPredicted RBP19.5■□□□□ 0.71
HSPG2-209ENST00000480900 METTL7BQ6UX53 244 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 C16orf59Q7L2K0 433 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 PPP1R13LQ8WUF5 828 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 GPRASP2Q96D09 838 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 CDHR1Q96JP9 859 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 SENP7Q9BQF6 1050 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 PCDHA6Q9UN73 950 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 PCDHA8Q9Y5H6 950 aa19.5■□□□□ 0.71
HSPG2-209ENST00000480900 PITPNM1O00562 1244 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 SCG2P13521 617 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 CCL23P55773 120 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 TOB2Q14106 344 aaPredicted RBP19.49■□□□□ 0.71
HSPG2-209ENST00000480900 MFSD10Q14728 455 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 KIAA0753Q2KHM9 967 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 DEFB123Q8N688 67 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 GIMAP8Q8ND71 665 aaPredicted RBP19.49■□□□□ 0.71
HSPG2-209ENST00000480900 GTF2IRD1Q9UHL9 959 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 NOD1Q9Y239 953 aa19.49■□□□□ 0.71
HSPG2-209ENST00000480900 GBF1Q92538 1859 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 SMCO2A6NFE2 343 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 NOP56O00567 594 aaKnown RBP19.48■□□□□ 0.71
HSPG2-209ENST00000480900 PRPF3O43395 683 aaKnown RBP19.48■□□□□ 0.71
HSPG2-209ENST00000480900 ACRP10323 421 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 ITGB5P18084 799 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 PDIA3P30101 505 aaKnown RBP19.48■□□□□ 0.71
HSPG2-209ENST00000480900 AP3B2Q13367 1082 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 BFSP2Q13515 415 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 PTGISQ16647 500 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 RASIP1Q5U651 963 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 GDF6Q6KF10 455 aaPredicted RBP19.48■□□□□ 0.71
HSPG2-209ENST00000480900 ZNF365Q70YC5 407 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 CYFIP1Q7L576 1253 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 C7orf31Q8N865 590 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 C16orf70Q9BSU1 422 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 BCAS3Q9H6U6 928 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 HDAC6Q9UBN7 1215 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 UBIAD1Q9Y5Z9 338 aa19.48■□□□□ 0.71
HSPG2-209ENST00000480900 ESYT2A0FGR8 921 aa19.47■□□□□ 0.71
HSPG2-209ENST00000480900 IFNAR1P17181 557 aa19.47■□□□□ 0.71
HSPG2-209ENST00000480900 NTRK3Q16288 839 aa19.47■□□□□ 0.71
HSPG2-209ENST00000480900 RPUSD2Q8IZ73 545 aaKnown RBP19.47■□□□□ 0.71
HSPG2-209ENST00000480900 CCDC155Q8N6L0 562 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms