RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PCP11498 1178 aaKnown RBP22.8■■□□□ 1.24
COL13A1-208ENST00000479733 NAPAP54920 295 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 TMED8Q6PL24 325 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-208ENST00000479733 TEX2Q8IWB9 1127 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 CD302Q8IX05 232 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 DHX37Q8IY37 1157 aaKnown RBP22.8■■□□□ 1.24
COL13A1-208ENST00000479733 MAD2L2Q9UI95 211 aa22.8■■□□□ 1.24
COL13A1-208ENST00000479733 A0A087X0T9 212 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 FAM228BP0C875 321 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 FAM83BQ5T0W9 1011 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 EP400NLQ6ZTU2 488 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 MREGQ8N565 214 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 UBLCP1Q8WVY7 318 aaPredicted RBP22.79■■□□□ 1.24
COL13A1-208ENST00000479733 IQCDQ96DY2 449 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 FAM212AQ96EL1 285 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 LSM14BQ9BX40 385 aaKnown RBP22.79■■□□□ 1.24
COL13A1-208ENST00000479733 HAUS2Q9NVX0 235 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 TBC1D7Q9P0N9 293 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 GMNCA6NCL1 334 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 DNM1LO00429 736 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 KLRK1P26718 216 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 INPP4AQ96PE3 977 aaPredicted RBP22.79■■□□□ 1.24
COL13A1-208ENST00000479733 RNF14Q9UBS8 474 aa22.79■■□□□ 1.24
COL13A1-208ENST00000479733 NIP7Q9Y221 180 aaKnown RBP eCLIP22.79■■□□□ 1.24
COL13A1-208ENST00000479733 RASSF9O75901 435 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 PRDX5P30044 214 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 E2F5Q15329 346 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 NAB2Q15742 525 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 TAF4BQ92750 862 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 NSUN4Q96CB9 384 aaKnown RBP22.78■■□□□ 1.24
COL13A1-208ENST00000479733 OSBPL7Q9BZF2 842 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 TAF1DQ9H5J8 278 aaPredicted RBP22.78■■□□□ 1.24
COL13A1-208ENST00000479733 BARHL2Q9NY43 387 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.78■■□□□ 1.24
COL13A1-208ENST00000479733 FAM170AA1A519 330 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 CEP104O60308 925 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 ECM2O94769 699 aaPredicted RBP22.78■■□□□ 1.24
COL13A1-208ENST00000479733 PRPHP41219 470 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 MEI1Q5TIA1 1274 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 FAM133AQ8N9E0 248 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 USP38Q8NB14 1042 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 CDK5RAP3Q96JB5 506 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 AK8Q96MA6 479 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 SSU72P8A0A1W2PR75 194 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 TRAF5O00463 557 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 TNNC1P63316 161 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 C6orf89Q6UWU4 347 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 N4BP2L2Q92802 583 aaPredicted RBP22.78■■□□□ 1.24
COL13A1-208ENST00000479733 UIMC1Q96RL1 719 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 MAGEF1Q9HAY2 307 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 TFCP2L1Q9NZI6 479 aa22.78■■□□□ 1.24
COL13A1-208ENST00000479733 BIN2Q9UBW5 565 aaPredicted RBP22.78■■□□□ 1.24
COL13A1-208ENST00000479733 CICQ96RK0 1608 aaPredicted RBP22.77■■□□□ 1.24
COL13A1-208ENST00000479733 SLIT2O94813 1529 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 DCDC2CA8MYV0 355 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 LAD1O00515 517 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 FLT3P36888 993 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 HSPA9P38646 679 aaKnown RBP22.77■■□□□ 1.24
COL13A1-208ENST00000479733 UAP1Q16222 522 aaPredicted RBP22.77■■□□□ 1.24
COL13A1-208ENST00000479733 FAM84BQ96KN1 310 aaPredicted RBP22.77■■□□□ 1.24
COL13A1-208ENST00000479733 NEUROG2Q9H2A3 272 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 MKNK2Q9HBH9 465 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 NOVA2Q9UNW9 492 aaKnown RBP22.77■■□□□ 1.24
COL13A1-208ENST00000479733 PPP1R2P41236 205 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 NONOQ15233 471 aaKnown RBP eCLIP22.77■■□□□ 1.24
COL13A1-208ENST00000479733 PPP4R3AQ6IN85 833 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 LRRC55Q6ZSA7 311 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 SLC44A5Q8NCS7 719 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 PAGR1Q9BTK6 254 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 BLOC1S4Q9NUP1 217 aa22.77■■□□□ 1.24
COL13A1-208ENST00000479733 ZNF804BA4D1E1 1349 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 GRID2IPA4D2P6 1211 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 SMCO2A6NFE2 343 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 NOL4O94818 638 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 SCP2P22307 547 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 NF2P35240 595 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 IL6STP40189 918 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-208ENST00000479733 GRB10Q13322 594 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 NEDD9Q14511 834 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 TBCKQ8TEA7 893 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 DDX47Q9H0S4 455 aaKnown RBP22.76■■□□□ 1.23
COL13A1-208ENST00000479733 CNOT8Q9UFF9 292 aaKnown RBP22.76■■□□□ 1.23
COL13A1-208ENST00000479733 CEP83Q9Y592 693 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 PAPPAQ13219 1627 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 PHF20L1A8MW92 1017 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 FGFR1OPO95684 399 aaKnown RBP22.76■■□□□ 1.23
COL13A1-208ENST00000479733 SERPING1P05155 500 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 ZNF844Q08AG5 666 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 ARFGAP2Q8N6H7 521 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 ODF2LQ9ULJ1 636 aa22.76■■□□□ 1.23
COL13A1-208ENST00000479733 POTEMA6NI47 508 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 KLHL30Q0D2K2 578 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 EMC10Q5UCC4 262 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 CYB5D1Q6P9G0 228 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 UNC13DQ70J99 1090 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 NELFCDQ8IXH7 590 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 TMEM260Q9NX78 707 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 PLCH1Q4KWH8 1693 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 COL5A2P05997 1499 aaPredicted RBP22.75■■□□□ 1.23
COL13A1-208ENST00000479733 PSEN1P49768 467 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms