RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 SNX17Q15036 470 aa12.23□□□□□ -0.45
FXR1-213ENST00000479176 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
FXR1-213ENST00000479176 EEPD1Q7L9B9 569 aa12.23□□□□□ -0.45
FXR1-213ENST00000479176 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
FXR1-213ENST00000479176 NSUN6Q8TEA1 469 aaKnown RBP12.23□□□□□ -0.45
FXR1-213ENST00000479176 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
FXR1-213ENST00000479176 TAAR1Q96RJ0 339 aa12.23□□□□□ -0.45
FXR1-213ENST00000479176 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
FXR1-213ENST00000479176 Q9Y3F1 56 aa12.23□□□□□ -0.45
FXR1-213ENST00000479176 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
FXR1-213ENST00000479176 KLF18A0A0U1RQI7 1052 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 MOXD2PA6NHM9 499 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 CASTP20810 708 aaKnown RBP12.22□□□□□ -0.45
FXR1-213ENST00000479176 ACLYP53396 1101 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 FUT2Q10981 343 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 RTN1Q16799 776 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 TMEM63BQ5T3F8 832 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 C1orf53Q5VUE5 145 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 Q6ZUG5 572 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 C7orf61Q8IZ16 206 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 IWS1Q96ST2 819 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 RMDN3Q96TC7 470 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 TM6SF1Q9BZW5 370 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 PXMP2Q9NR77 195 aa12.22□□□□□ -0.45
FXR1-213ENST00000479176 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
FXR1-213ENST00000479176 FRMPD4Q14CM0 1322 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 CNTNAP5Q8WYK1 1306 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 A0A1W2PQ45 241 aaPredicted RBP12.21□□□□□ -0.45
FXR1-213ENST00000479176 A0A1W2PQY0 241 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 GCOM1H8Y6P7 765 aaPredicted RBP12.21□□□□□ -0.45
FXR1-213ENST00000479176 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
FXR1-213ENST00000479176 POLR2MP0CAP2 368 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 HOXA13P31271 388 aaPredicted RBP12.21□□□□□ -0.45
FXR1-213ENST00000479176 EVCP57679 992 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 PPP2R5BQ15173 497 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 KCNA10Q16322 511 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 TLK2Q86UE8 772 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
FXR1-213ENST00000479176 BRF1Q92994 677 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 FERMT2Q96AC1 680 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 SPC25Q9HBM1 224 aa12.21□□□□□ -0.45
FXR1-213ENST00000479176 LTBP2Q14767 1821 aa12.21□□□□□ -0.46
FXR1-213ENST00000479176 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 GOLGA8AA7E2F4 631 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 GOLGA8BA8MQT2 603 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 PIK3CDO00329 1044 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 EIF2AK2P19525 551 aaKnown RBP12.2□□□□□ -0.46
FXR1-213ENST00000479176 PTGS1P23219 599 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 CDC27P30260 824 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 RTP1P59025 263 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 FGD1P98174 961 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 APOBRQ0VD83 1088 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 STXBP2Q15833 593 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 ARHGEF16Q5VV41 709 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 SCFD2Q8WU76 684 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 PDCD2LQ9BRP1 358 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 AP5M1Q9H0R1 490 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
FXR1-213ENST00000479176 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
FXR1-213ENST00000479176 SCN10AQ9Y5Y9 1956 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 ELP1O95163 1332 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 MEIS2O14770 477 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 NKRFO15226 690 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■■□ 23.6
FXR1-213ENST00000479176 DYNC1LI2O43237 492 aaPredicted RBP12.19□□□□□ -0.46
FXR1-213ENST00000479176 EIF3JO75822 258 aaKnown RBP12.19□□□□□ -0.46
FXR1-213ENST00000479176 ASGR1P07306 291 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 NR3C2P08235 984 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
FXR1-213ENST00000479176 BEX3Q00994 111 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 TOB2Q14106 344 aaPredicted RBP12.19□□□□□ -0.46
FXR1-213ENST00000479176 PGM5Q15124 567 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
FXR1-213ENST00000479176 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
FXR1-213ENST00000479176 CCDC82Q8N4S0 544 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 IL27Q8NEV9 243 aa12.19□□□□□ -0.46
FXR1-213ENST00000479176 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
FXR1-213ENST00000479176 RGS20O76081 388 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 ARIH2O95376 493 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 ADD1P35611 737 aaKnown RBP12.18□□□□□ -0.46
FXR1-213ENST00000479176 ANAPC15P60006 121 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 WWC2Q6AWC2 1192 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 VSIG10LQ86VR7 867 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 FCHSD1Q86WN1 690 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 IL31RAQ8NI17 732 aa12.18□□□□□ -0.46
FXR1-213ENST00000479176 GLT1D1Q96MS3 346 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms